Physeter catodon (sperm whale): 102981259
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Entry
102981259 CDS
T06011
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102981259 (FREM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
102981259
NCBI-ProteinID:
XP_054943187
Ensembl:
ENSPCTG00005011922
UniProt:
A0A9W2WVD6
LinkDB
All DBs
Position
9:complement(57156285..57392595)
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AA seq
2175 aa
AA seq
DB search
MSSLSWGGLSALLLLLRLLPGWASPTLIRVNRGVRVTKGSSAFLSQDDLKFAIPKEKDAC
KVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRLTETDTFT
ETFILRVYLLEPDCNIIRMSDNVLEVSEFYGLSRAIDKNLLRFDYERTASLECTVRLDPV
ATRLPAHGQLVLVEPRPEEPRGDQPRSFFPESQLGTELKCPGGRCPLELKKIGSLKVSCE
EFLLSGLRYQHLSPPSPHIDYISIRLDLTDSRSKVIYKSESVWLPVYIRAGIPNQIPRAA
FMAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSF
TWRDLSDMQIAYQPPNSSHSERRHYEVELEVYDFFFERSAPITVHISIRTTDTNAPRVSW
NTGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVIVDGLKHGQLTLRGGKGFLFTVADLQA
GVVQYHHDDSDSTKDFVVFRIFDGQHSIRHKFPINILPKDDSPPFLITNVVIELEEGQTI
LIQGSKLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFLQMDLFNGIIYY
RHFGGEIFEDSFEFVLWDSHEPPNLSEPQVVTIHITPVDDQLPKEVPGVSRHLVVKETEV
AYITKKYLHFVDTESYDRELLYTVTTPPFFSSSHRHLDAGKLFMVDSIPRLTKNPAAPGL
KSFTQHAVNHMKVAYMPPMQDIGPHPRHVQFAFSVSNQHGGTLFGICFNITILPVDNQVP
EVFTNPLRVAEGSQCVISTEHVLVSDVDTKLDNIHLSLQRQPQHGSVELNGFPLNTGAIF
SWGDLQDLKVRYQHDGSEILQDDILLEVTDGINAAECVLYIEVFPVNDEPPVLKADLIPM
MHCSEGEEVVITSEYIFATDVDSDDTKLMFMIVREPQHGTVRKAGVTVHQFSQGDVMAGA
VTYKHTGGEIGLVPCFDTITLVVSDTEAGPFVNGPHPSVPLRESFPVYDLNITVYPVDNQ
SPSIAIGTMFFVDEGSSAALTINHLSATDPDTAADDLEFVLVSPPQFGYLENTLPSAGFE
KSNMGISIASFQWKDMKALHINYVQSRHLRMEPTADRFMVYVTDGKRRSLEIPFYIIINP
INDEAPDFIVQNITVCEGQMRELDSSIINAVDRDIPKDPLLFSVTHKPRHGLLINGVFSK
DFPQYKQSPNPGQKHELVYNFSMELLKNGMRLMYLHDDSESLADDFTIQLSDGKHKILKT
ISVEVTPVNDEKPVLSKKAEITVNMGETHIISSAVLSAIDEDSPREKIYYLFERLPQNGQ
LQLKIGRDWVPLHPGMKCTQEEVDLNLLKYTHTGTMDSQNRDSFTFYLWDGDNRSPEFDC
HITIKDMGKGDIVIRAKPLLVSKGDRGFLMTTTLLAVDGTDKPEELLYVITSPPRYGQVE
YVHYPGVPITSFSQMDIAGQTVCYVHKSTAAAHRDMFRFIVSNGLQTKPGVFEITLETVD
TALPVVTRNKGLRLAEGATGLLSPDLLQLTDPDTPAENLTFLLAQLPQHGQLYLRGTVPL
PHSFTQLDVDSGHVTYRHSRGHSRTDRFTFVATDGTDQGFLVDGRRWQEPVSFTIQVDQV
DKAAPHITHLHSPSQVGLLKNGCYGIYITSHVLKASDPDTDDNQIIFKILRGPQHGHLEN
TTTGEFIHEKFSQKDLNSKTVLYIINPSLEVNSDTMEFQVMDPTGNSATPQILELKWSRI
EWSQTEYEVCENVGVLPLEITRKGYSMDSAFVSVKVNQVSATAGKDFTMTPSKLIQFDPG
MSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSYAFNA
NMPNAWEKGIWSLLSPGASSRTTSGSFHPERRPLPSSKQLAVARVDTLRDFDSEDLSRMK
LRTQGNGKRVHPSSVYRNETDIIYNYHGMISLKLEDDTSSTHKRKAKVSIVSQPQKTIKV
AELPQADKEESTTGSHFPQQDRLPSFPKNCTLELKGLFHFEESLQKLYKCNGIAWKSWSP
HTKVEDKSCPAGWHHHLGYCHSLITEQKGTWIIAAQACREHHLGSLVTVLSRQHMQWLWD
ISGRKPFWIGLNDQVRAGHWEWIGGEPVTFTNWRRGLPQRSKPGKNCVLVQRQGKWQTKD
CKKGKSHNYMCSRKL
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctaagctggggtgggctcagtgccctgctgctgctgctgaggctgcttcca
ggctgggccagccccaccctcatccgtgttaaccgaggggtcagggtaacgaagggcagc
tccgctttcctgtctcaggatgacctgaagttcgccatccccaaagagaaagatgcctgc
aaagtggaagttgtgatgaatgagccaataacccagagggttggaaaactcactccacag
gtctttgactgccatttccttcccaatgaagtaaagtatactcacaacggttgcccaatt
cttgatgaagacacagtgaagcttagactttacagattgactgagacagacaccttcacg
gaaacctttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtatgagt
gacaatgtactggaggtgtctgaattctatggcctgtcccgagccattgataaaaacctg
ctcagatttgattatgagaggacggctagtctggagtgtacagtcaggctggaccctgtg
gcaactcggctgccagcccatggccagctggttctggtggagccccggccggaagaacct
cgtggagatcagccacgcagttttttccccgagtctcaactgggaacagaactgaagtgt
ccaggtggcagatgtcccctggaactgaagaaaataggaagtctcaaagtgagctgtgag
gagttcttgctgtcggggcttcgatatcaacatctgagtcccccttctccgcacattgat
tacatctccatccgactggacctcacagatagcaggagtaaagtcatatacaagtcagag
agtgtgtggttacccgtctatatcagagctggcatccctaatcagattccaagggctgca
ttcatggccatgtttattctggaagtggatcagttcatcctgacctctttgactacatca
gttctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaa
gccccgctccaaggctatgtgactcacctgtgggatcacaccagaccggtgtcctccttc
acctggagagatctaagtgacatgcaaattgcttatcagccaccaaacagcagccattct
gagaggagacattatgaggtggagttggaagtatatgacttcttctttgaaaggagcgca
cctattaccgtccacatctccatcagaacgacagacacaaatgccccgagagtgtcctgg
aatacaggtctgaatctcctagagggacagtctcgggccatcacttgggaacagtttcag
atcgttgacaatgatgacattcatgctgtccaggtagtcattgtggatggcttgaagcat
ggacagcttactctgagaggggggaaggggtttctcttcaccgtggctgaccttcaggct
ggagtcgttcaatatcatcatgacgacagtgactccaccaaagactttgtggtcttcagg
atattcgacggccagcacagcatccgacataagtttcccatcaacatcttgcccaaagat
gatagcccaccattcctcataaccaatgttgtgattgaactggaggaggggcagaccata
ctgatccagggttccaagctgagagcttcagacatggactccagtgatgactacatcttc
tttaatatcacgaaacccccacaggctggagagatcatgaagaagccagcaccaggactg
ataggctatcctgtccctggcttccttcagatggatctgttcaatggcatcatttactat
cgtcattttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccac
gaacctccaaatctctcagagccacaggtggtgacaatccatatcactccagtagatgac
cagcttccaaaagaggttcctggagtttctcgacatttggttgttaaggaaacggaggtg
gcgtatatcactaagaaatatctacattttgtagatacagaatcatatgacagggagctg
ctctacacagtaaccactcctccatttttctcctctagccacagacacttggatgctggg
aaattattcatggtagacagcataccaaggctaaccaaaaaccctgcagctccagggttg
aagtcattcactcagcatgctgtgaaccacatgaaagtggcctacatgccacccatgcaa
gatataggcccccatccccgacacgtccagtttgccttttccgtcagtaaccagcacggt
ggcactttgttcgggatctgctttaacatcacgattcttccggtggacaatcaggtccct
gaggtatttaccaaccctctgagagtggctgagggaagtcagtgtgtcatcagcacagag
catgtcctggtttctgacgtggacaccaaactggacaacatccacctttccttgcagaga
cagcctcagcacggaagcgtggagctgaatggatttcctctaaacacaggggccatattt
tcttggggagacctccaggacttaaaagttaggtatcagcatgatggatctgagatactt
caggatgacatactactagaggtcacagatggcataaatgcagcagaatgtgtgctatac
attgaggtgttccctgtaaatgatgagccaccggtcctaaaggcagacctcattcccatg
atgcactgctcagagggcgaagaggtggtcattacctctgaatacatttttgctactgat
gtggacagtgatgatacgaaactgatgttcatgattgttcgagaacctcagcatgggaca
gtgaggaaagctggggtcacagtgcatcagttttctcagggagatgttatggcaggggct
gtgacgtacaaacacacaggtggtgagattggcctggtgccttgttttgacaccataacg
ttggtagtttcggacacagaagctggcccttttgtgaatggacctcatccatctgttcct
cttcgtgagtcctttccagtgtatgatctcaacatcacagtgtatccggtggacaaccaa
tcaccttcaattgcaataggtaccatgttctttgtagatgagggttcctcagcagccctt
actattaaccatttgtctgccactgaccctgacactgcagcagatgacttggaatttgtt
ttggtttctcctccccagttcggctaccttgaaaacacactaccttctgcaggttttgaa
aaaagcaatatgggcatcagcatagcttcgtttcagtggaaagacatgaaggctttacac
attaactatgtgcagtccaggcatctgaggatggaaccaacagccgaccggttcatggtg
tatgtcactgatgggaaacgacgctccttggagataccattttacattataatcaacccc
ataaatgatgaagctcctgattttatagtgcaaaatattactgtgtgtgagggtcagatg
agagagctggattcttccatcattaatgctgttgaccgggacattcccaaggaccctttg
ctgttcagcgtcactcacaagccacgtcatggcctcctcatcaacggggtgtttagcaaa
gactttcctcagtataagcaatcacccaaccctggccagaagcatgaacttgtttacaac
ttttccatggaacttctcaagaatggaatgaggttgatgtatttgcatgatgactcagag
agccttgctgatgactttacaatccagttgtcggatgggaaacacaagatacttaaaacc
atttctgtagaggtcaccccagttaatgatgagaaaccagtgctgagcaagaaagctgaa
attacagtgaatatgggtgaaactcatattatttctagtgcagttctgtcagccatagat
gaagactcacccagggagaagatttactacttatttgaaaggcttccccaaaatgggcaa
cttcagcttaagatagggagggactgggtccctctccatcctggcatgaaatgcactcag
gaagaagtggatctgaacttgctgaaatacacacacaccggcacaatggattcccagaac
cgagacagcttcaccttctacctctgggacggtgacaataggtcccctgaatttgactgt
cacatcaccatcaaggatatgggaaaaggtgatattgtcatccgggcaaaaccacttttg
gtgtctaaaggtgacagaggtttcctgatgaccaccacccttcttgctgtggacggaaca
gacaagcctgaggaacttctctatgtcatcacctccccaccacgatacggccaggtcgaa
tacgtccactatcccggggtccccattacaagcttcagccaaatggacatagcaggacag
acggtctgctacgtacataagagcacggcagctgcccacagagacatgttcagattcatc
gtgagcaatggactgcagaccaagcccggggtgtttgagatcacactggagactgtggac
acagccttacctgtggtgaccaggaacaaggggctgagactggctgaaggggccacgggc
ctcctctcccctgacctccttcagcttaccgaccctgacactccagcggagaacctcacc
ttccttttggcccagcttccacaacacggccagctctacctgcgggggacagtgccactt
ccacacagtttcactcagctggacgtggacagcgggcatgtgacctacaggcactcgaga
gggcactctcgcactgaccgctttacttttgtggccacggatgggacagaccaaggcttt
cttgtggatgggagaaggtggcaagaacctgtttcattcaccatccaggtggaccaggtg
gacaaagcagccccccacatcacacatttgcattccccttctcaagtggggctcctgaaa
aatggttgttatgggatttacatcacttcccacgtgttgaaggcatcggaccccgacact
gatgacaatcagatcatctttaagattttgcgaggcccccaacatggacatctggagaat
acaacaacaggtgaatttatccatgagaaatttagccaaaaggacttaaacagtaagacc
gttctttacatcataaacccatctttggaagtaaattcagataccatggaatttcaagtc
atggaccccacagggaactctgccactcctcaaatcttggaactgaagtggtctcgtatt
gagtggtcacagactgaatatgaggtctgtgagaatgtgggcgtattgcccttggaaatt
accagaaagggatactccatggactcggcctttgtgagtgtaaaggtcaaccaagtgtca
gctacagctggaaaggatttcactatgactccatctaagctgattcagtttgacccagga
atgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagatgatgag
gtctttgaagtaattctgaactcccccgtgaatgcggttcttggcacaaagacaaaaact
gcagtgaagattttggactcaaaaggaggacagtgccatccttcatatgccttcaatgca
aacatgcccaatgcatgggagaagggcatttggagcctgctctccccaggggcttcctca
cgcaccacttctggttcctttcatccggaaagaagaccccttccatcttccaagcagcta
gcagtcgccagggtagacaccctgcgggactttgattctgaagatctttctcgaatgaag
cttaggacccaggggaatggcaaaagagtccatccatcctctgtttatagaaatgaaaca
gacatcatctacaattatcatggaatgatttccctgaaactggaggatgacacttcctca
actcacaaaaggaaggccaaagtatccattgttagtcagccacaaaagacaatcaaagtg
gcagaactgcctcaagcagataaggaggaatccacaaccggctcacacttcccccagcag
gaccgtttgccctcatttccaaagaactgcacactggaattaaagggactcttccacttt
gaagaaagcctccaaaagctgtataagtgcaatggaattgcctggaaatcttggagccct
cacaccaaggtggaagataaatcatgcccagctgggtggcaccatcacttaggctactgc
cactccttgatcacagagcagaaaggcacctggatcatagccgcccaagcttgcagggaa
catcacctgggcagccttgtaactgtcctctccaggcagcatatgcagtggctttgggac
atcagtggaagaaagcccttctggataggtttgaatgaccaagtgcgtgctggccactgg
gagtggatcggcggtgaacctgtgaccttcaccaactggaggagagggcttcctcaacgt
tcaaagcctggcaagaactgtgttttagttcaaagacaaggaaaatggcaaacaaaggac
tgtaagaagggcaaatctcacaattatatgtgctccaggaaactctaa
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