Physeter macrocephalus (sperm whale): 102981460
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Entry
102981460 CDS
T06011
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102981460 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcad01007
]
102981460 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102981460 (VARS2)
Enzymes [BR:
pcad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
102981460 (VARS2)
Amino acid related enzymes [BR:
pcad01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102981460 (VARS2)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102981460 (VARS2)
Prokaryotic type
102981460 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
102981460
NCBI-ProteinID:
XP_028334987
Ensembl:
ENSPCTG00005015103
UniProt:
A0A455AGT2
LinkDB
All DBs
Position
18:complement(85420644..85432327)
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AA seq
1062 aa
AA seq
DB search
MPHLPLASFRPPLWGLRPSRGLPRSHPLSSQSEPNGSAISQRNREAKQKRLRQKQSALEA
GITQKSKSPAESSKAWTPKEIVLYEIPTEHGEKKDVSRPLPPAYSPQYVEAAWYPWWVRE
GFFKPEYQARLPQATRETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELSREDFFREVWKWKEEKGGEICEQLRVLGASL
DWDRECFTMDAGFSVAVTEAFVRLYKAGLLYRSRQLVNWSCALRSAISDIEVESRPLPGC
TELRLPDSPTPVSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPNDSRYTHL
HGRQLRHPLTGQLLPLITDCAVQPHLGTGAVKVTPAHSPADAELGARHGLSPLSVIAEDG
TMTSLCGDWLQGLHRFVAREKILSALKERGLFRGFQDHPMVLPICSRSGDVVEYLPKSQW
FVRCREMGDRAAKAVESGALELSPSFHQKNWQHWFSPTGDWCVSRQLWWGHQIPAYLVVE
EHTQGDTKDCWVVGRTEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGW
PQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFGKVLLHSMVRDRQGRKM
SKSLGNVLDPRDIISGVELQVLQEKLRDGNLDPAELVIAASAQRKDFPHGIPECGTDALR
FALCSHGALGGDLHLSASEVLSFRHFCNKIWNALRFILNALGEKFIPQPAEELSPASPMD
AWILSCLARTARDCERGFLTRELALVTHALHHFWLHNLCDVYLEAVKPVLLHSPHPPGPL
QVLFSCADVGLRLLAPLMPFLAEELWQRLPPRPGGAPAPSICVAPYPSARSLERWHQPEL
ERHFSRVQEAVQVLRALRATYQLTKARPRVLLQSSEPGEQGLFEAFLEPLGTLGHCGAVG
LLPPAAAAPSGWAQAALSDTVQVYMELQGLVDPQTHLPRLAARRHKLQKQLDGLIARTPS
EGEAETQRQQRLSSLQLELSKLDKAASHLRHLMDVSPSPGEL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctctggcctcttttcgaccaccactctgggggttgaggccctcaagg
ggactccccaggtcccatcccctttccagccagtcagagcccaatggatcagccatctcc
cagaggaaccgtgaagccaaacagaagcgcctgcgacagaagcagtcggcgctggaggct
ggaatcacccagaagagcaagtcacctgcagaatccagtaaggcctggacccctaaggag
atagtgttgtatgaaatccccacggaacatggtgaaaagaaagatgtctcccggcccctg
cctcctgcatacagtccccaatatgttgaggctgcctggtacccttggtgggtgcgagag
ggcttcttcaaaccagaatatcaggccaggctgccccaggccacacgggagaccttttcc
atgtgtatcccaccccccaatgtcacgggctccctgcatattgggcatgcgctgaccgta
gccatacaggacgccctcgtgcgctggcaccggatgcgtggagatcaggtgctatgggtc
cctggatcagatcatgcagggattgctactcaagctgtggtggagaaacagctgtggaag
gagcgaggagtgaggagacacgagctgagccgggaagacttctttagggaggtgtggaag
tggaaggaggagaaaggtggagagatatgtgagcagctccgagtgctgggggcctccctg
gactgggaccgagagtgttttactatggatgccggcttctcagtggctgtgacagaagct
ttcgtgcggctctacaaggctgggttgttgtaccggagccggcagcttgtcaactggtcg
tgtgctttacgctctgccatctcggatattgaggtggagagccggcccctccctggctgc
acggagcttcggttgcctgactcccccacccctgtgtcttttggcctcctcttttccgtg
gccttccccgtggatggagagcctgatgcagaggttgtggtaggaaccacgaggccagag
acgctgcctggagacgtggctgtggccgtccatcccaacgactcccgatacacacatcta
catggacgacaacttcgtcatcccttgacggggcagcttctcccccttatcacagactgt
gctgttcagccacacctgggcacaggggcagtgaaggtgactccagctcacagccctgcc
gatgctgagctgggggcccgacacggcttgagccccctgagtgtcattgcggaggatggg
acgatgacctccctctgcggggactggctgcagggtcttcaccgatttgtggcccgggaa
aagattctgtcggcactgaaggaacggggcctgttccggggattccaggaccaccctatg
gtgctgcccatttgcagccgttccggggatgtggtagaatacctaccgaagagccagtgg
tttgtccgctgccgggaaatgggggacagagctgccaaggctgtggagtcaggggccctg
gagctcagtccctccttccaccagaagaactggcagcactggttttcccccactggggac
tggtgcgtctcccggcagctgtggtggggtcatcagattccagcctacctggttgtagag
gagcacacacagggcgacacgaaggactgttgggtggtcgggcggacagaggctgaggcc
agagaagtagctgcagaattgacagggagaccaggggcggagctgaccctggagagggac
cccgatgtcctggatacctggttctcctcggctcttttccccttttctgccctgggctgg
ccccaagagaccccagacctggctcgtttctaccccctgtcacttttggaaacgggcagt
gacctcttgctgttctgggtgggccgcatggtcatgttggggacccagctcacagggcag
ctccccttcggcaaggtgttgctgcactccatggttcgggacaggcagggccggaagatg
agcaagtcgctggggaatgtgctggacccacgggacatcatcagtggggtggagctgcag
gtgctgcaggagaagctgagggatgggaacttggacccggcagagctggtgatcgcggcc
tcagcacagagaaaggacttccctcatgggatccccgagtgtgggacagatgccctgaga
ttcgccctgtgctcccatggggccctggggggcgacttgcacctgtctgcctctgaggtc
ctgagcttcagacatttctgcaataagatctggaatgccctgcgctttatcctgaatgct
cttggggagaaattcataccccagcctgcagaggagctgtcccccgcctcccccatggac
gcctggatcctcagctgcctggcccgcactgcccgggactgcgagcgaggcttcctcacc
cgcgagctcgcgctcgtcacccacgcgctgcaccacttctggcttcacaacctctgtgat
gtctacttggaggctgtgaagcctgtgctgttgcactcgccccaccccccggggcctctt
caggtcctgttctcctgcgctgacgtcggtctccgcctcctcgccccgctgatgcccttc
ctggctgaagagctctggcagaggctgccccccaggcctggtggtgcccctgcccccagc
atctgtgttgccccctaccccagtgcccgcagcttggagcgctggcaccagcccgagctg
gagcggcacttctcccgggtccaggaggctgtgcaggtgctgagggctctccgcgccacg
taccagctcaccaaggcccggccccgagtgctgctgcagagctcagagccaggagagcag
ggcctctttgaggccttcctggagcccctgggcaccctgggccactgtggggccgtgggc
cttctacccccagctgcagcagctccctcgggctgggcccaggccgctctcagtgatacc
gttcaggtctacatggagctgcagggcctggtagacccccagacccacctacctcggcta
gctgcccgaagacacaagttgcagaagcagcttgatggcctcatagcccggaccccatca
gagggagaggcagagactcagaggcagcagaggctttcttccctccagttggaactgtca
aaactggacaaggcggcctctcacctccggcacttgatggatgtgtctcccagccctggg
gagctttga
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