KEGG T06011: 102981464

Physeter macrocephalus (sperm whale): 102981464

Entry

102981464         CDS       T06011

Symbol

EXOSC1

Name

(RefSeq) exosome complex component CSL4 isoform X1

K07573

exosome complex component CSL4

Organism

pcad Physeter macrocephalus (sperm whale)

Pathway

pcad03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:pcad00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102981464 (EXOSC1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102981464 (EXOSC1)
Messenger RNA biogenesis [BR:pcad03019]
Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     102981464 (EXOSC1)
Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     102981464 (EXOSC1)

SSDB

Motif

Pfam:

EXOSC1 ECR1_N S1_RRP4

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

20:54588619..54595041

AA seq 214 aa
MLANERSASFSSGLGTGAVMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCL
IKSSENGALPVISVMRETESQLLPHVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRG
TIRKEDIRATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESG
VQMVPISWCEMQCPKTHTKEFRKVARVQPEFLQT

NT seq 645 nt +upstreamnt +downstreamnt
atgttggccaatgagaggtcggcttcattttcctccggacttgggacaggggcagtcatg
gcgccccccgtgaggtactgcatccccggcgaacgtctgtgtaacttggaagagggcagc
ccgggcagcggcacctacacccggcatggctacatcttttcgtcgcttgctggctgcctg
ataaagagcagcgagaacggcgcgcttcctgtcatatctgtgatgagagaaacagagtcc
caattactgccacatgtgggagctattgtaacctgtaaggtctctagcatcaattcacgc
tttgccaaagtacacatcctatatgtggggtccacgccacttaagaactcttttcgaggg
actatccgcaaagaagacatccgagctactgaaaaagacaaggttgaaatttataagagt
ttccgcccaggggacattgtcttggccaaagtgatctccctaggtgatgcgcagtccaac
tacctcctaaccactgccgaaaatgagctgggagtggtggtggcccacagtgaatcgggt
gtccagatggttcccatcagctggtgtgagatgcagtgccctaagacccacacaaaagaa
ttccggaaagtggcccgagtacagcctgaattcttacagacctaa

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