KEGG   Physeter macrocephalus (sperm whale): 102981542
Entry
102981542         CDS       T06011                                 
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
  KO
K16617  collagen type XIII alpha
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    102981542 (COL13A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pcad00536]
    102981542 (COL13A1)
Glycosaminoglycan binding proteins [BR:pcad00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102981542 (COL13A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 102981542
NCBI-ProteinID: XP_028336659
Ensembl: ENSPCTG00005007462
UniProt: A0A455AL71
LinkDB
Position
20:21924004..22019420
AA seq 635 aa
MPGRVGGKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGRPGPKGE
MGPPGQKGEKGQCGEYPHRLLPLLNSVRLAPPPVIQRRTFQGEQGQAGIQGPPGPPGPPG
PSGPLGHPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAA
AGMKGEPGIPGAKGDPGATGKLGPPGLPGKTGQRGEKGAAGPPGLLGLLGQKGEKGDAGN
SIGGGRGEPGPPGLPGPPGPKGEAGADGQAGAPGRQGDKGEPGAAGEQGPAGPKGSKGEP
GKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGE
KGPRGKPGDVGPPGPQGPPGKAGPAGMKGEDGPPGNPGEKGEKGEMGQPGPPGLDGPTGE
KGEPGDQGRPGATGLPGPIGLPGFTGEKGEDGEKGDPGVEVPGPPGPEGPPGPPGLQGVP
GPKGEAGLDGAKGEKGVQGEKGDRGPLGLPMVLSAGCTLESPGAFQGASGLDGRPGPPGT
PGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGHRGFKGEKGEPGL
PGLDGLDAPCPLGEDGLPVQGCWNKGQSPWLVAKK
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgcctggacgtgtgggaggaaagggccaaccaggcgagaagggggccccaggagatgcc
gggatgtccatcatcggtccccgcggccctcccggtcagccgggcactcgaggttttcct
ggatttccgggtcccattgggcttgacggcaaaccgggccgccccggaccaaaaggggag
atgggacctccaggacaaaaaggagaaaagggtcagtgtggagagtacccacaccggctg
ctgcctctcctcaattcagtgcggctggctccaccgccagtcattcaaaggcggaccttc
cagggtgaacagggccaggctggcatccaaggcccaccagggccaccaggccctcctgga
ccgagtggacctctggggcacccaggactgccagggcccatggggccacccggcttacct
gggcctcctggaccaaagggagacccggggatccagggctaccacggccggaagggagaa
cgaggcatgccagggatgccgggcaaacacggagcaaagggggctcctggaatcgctgcc
gcggggatgaagggtgagcctgggatcccaggagccaagggagacccaggagcaacaggg
aagctggggcccccaggtttgccgggaaagacggggcagaggggtgagaagggggctgcg
ggcccccctgggctactcggcctcctagggcagaagggagaaaaaggtgatgctggcaac
tccattggagggggcagaggggagcctggtcccccagggctccctgggcccccagggcca
aagggggaagctggagctgatggccaggcgggcgccccaggacggcaaggagacaagggg
gagcctggagcagctggagaacagggacctgctggccccaagggctccaagggcgaaccc
gggaaaggagagatggtggactacaacggaaacatcaacgaggctctccaggagatccgg
acactggccctgatggggccccctggtcttcctgggcagattggcccacccggagctcca
gggatcccaggccagaagggggagattgggctgcccggccctcccggacacgatggggaa
aagggacctcgaggcaaaccaggagatgtgggccctcctggtccccaaggccccccagga
aaggctgggcctgcaggaatgaagggagaagatggccctccggggaacccaggagagaag
ggggagaaaggggagatggggcagccaggcccaccgggtctagacggcccaactggggag
aaaggagaaccaggtgaccaagggagacctggagcgaccggattgcctggcccaatcggg
ctcccaggattcacgggagagaaaggagaagacggggagaagggtgacccaggagtggag
gttcctgggccaccagggccagagggacctcccggaccgccggggctccaaggcgttcct
ggaccaaagggggaagcagggctagatggagcaaaaggagagaagggcgtccagggagaa
aaaggagaccgaggtcctctgggattacccatggttctcagtgctggctgcacattggaa
tcccctggagctttccaaggagcttcaggtttggacggcaggcctgggccaccgggtact
ccaggaccaattggagttccaggcccagcgggaccaaagggagagaggggcagcaaaggc
gaccctgggatgacaggaccaacgggagcagctgggcttcctggtttacacggaccaccc
ggggacaaaggaaaccggggacaccgaggttttaaaggagagaaaggggagccagggtta
ccagggctggacggactggatgccccgtgcccactgggtgaagatggcttgccagtccag
ggctgctggaataagggccagagtccatggttagtagccaagaagtga

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