KEGG   Physeter macrocephalus (sperm whale): 102981663
Entry
102981663         CDS       T06011                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03013  Nucleocytoplasmic transport
pcad03015  mRNA surveillance pathway
pcad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102981663 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102981663 (RBM8A)
   03015 mRNA surveillance pathway
    102981663 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    102981663 (RBM8A)
   03041 Spliceosome [BR:pcad03041]
    102981663 (RBM8A)
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102981663 (RBM8A)
Spliceosome [BR:pcad03041]
 Complex C
  Other components
   EJC/TREX
    102981663 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 102981663
NCBI-ProteinID: XP_007130832
Ensembl: ENSPCTG00005012300
UniProt: A0A2Y9FXH6
LinkDB
Position
4:76167744..76169489
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARMREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtactggatcttcatgaggccgggggcgaggatttcgccatggatgaggat
ggggacgagagcatccacaaactgaaagaaaaagcgaagaaacggaagggccgtggcttt
ggctctgaagaggggtctcgagcgcggatgcgtgaggattatgacagcgtggagcaggat
ggcgatgaacccggaccacagcgctctgttgaaggttggattctctttgttactggagtc
catgaggaagccacggaagaagacatccatgataaatttgcagagtatggagaaataaaa
aacatccacctcaacctggacagacgtacaggatatctaaagggatatactctagttgag
tatgaaacatacaaggaggcccaagctgctatggagggactcaatggccaggatttgatg
ggacagccaatcagcgtagactggtgttttgttcggggtccacccaagggcaagaggaga
ggtggccgcagacgcagcaggagtccagaccggaggcgtcgctga

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