Physeter macrocephalus (sperm whale): 102981775
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Entry
102981775 CDS
T06011
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102981775 (CHD1)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102981775 (CHD1)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102981775 (CHD1)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102981775 (CHD1)
SLIK complex
102981775 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102981775
NCBI-ProteinID:
XP_023985468
Ensembl:
ENSPCTG00005017418
UniProt:
A0A2Y9T3E5
LinkDB
All DBs
Position
8:complement(97839498..97918027)
Genome browser
AA seq
1709 aa
AA seq
DB search
MNGHSDEESVRNSSGESSHSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQHQASSNSGSEE
DSSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEP
KNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEDEEDYDNDKRSSRRQATVNVSYK
EDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDP
NAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL
IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQ
RLSGAGGSKRRKVRAKKNKAMKSIKMKEEIKSDSSPLPSEKSDEDDDKLSESKSDSKERS
KKSSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSER
EQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAI
KKRQESQQNNDQNSNLNTQVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRH
QGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLEG
SLKDRTHSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQLDHRASSSGSRSPLDQ
RSPYGSRSPFEHSVEHRSTPEHTWSSRKT
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagagtcaagccattcg
gatgatgattctgggtcagcgtcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatccgaatcgggcagt
cagtcagagtctgagtcagacaattcccgagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcaacagcagcaacatcaagcttcatctaatagtggatcagaagag
gattcttctagcagtgaagattccgatgactcatcgagtgaggtcaaaaggaaaaagcat
aaagatgaagattggcagatgtctgggtcaggatctccatctcagtctggttcagattca
gaatctgaagaagaaagagataaaagtagttgtgatgaaacagaatctgattatgagcca
aaaaacaaagttaaaagtagaaaacctcaaaatagatctaagtcaaaaaatggaaaaaag
attattggacaaaaaaagagacagattgattcatctgaggaggaggaggaggatgaagaa
gactatgataatgataaaagaagctctcgtcgacaagcaactgtcaatgttagctataag
gaagatgaagaaatgaaaacagattctgatgacctacttgaagtctgtggagaggatgtt
cctcaacccgaggaagaggaatttgaaacaatagaacggtttatggattgtcggattggg
agaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgaccca
aatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatggaaa
ggatggtcacatatccacaatacttgggagacagaagaaacccttaagcagcagaatgtt
agaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatggttg
aaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagatgat
ctccataagcagtatcaaatagtggagcgaataattgctcattccaatcaaaagtcagct
gctggctatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgg
gaagatggagctctcatttccaaaaagtttcaggcgtgcatagatgagtatttcagcaga
aatcaatcaaaaactactccttttaaagactgcaaagttttaaaacaaaggccaagattt
gtagccctaaagaagcagccatcctatattggaggacatgagggattagaattaagagat
tatcaactgaatggcttaaattggcttgctcactcttggtgcaaaggaaatagttgcata
cttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactatttg
tttcatgaacaccaattatatggaccttttctattagtagtaccactctccactctcact
tcctggcaaagggagattcaaacatgggcttctcaaatgaatgctgtggtttatttaggt
gacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaacgg
ttaaaatttaatatactgttaacaacttatgaaatcttattgaaggataaggcattcctt
ggaggtctaaattgggcatttataggtgtagacgaagcacatcgattaaagaatgatgat
tctcttctgtataaaactttaatagattttaagtccaatcaccgtctccttatcactgga
actcctctgcaaaactccctcaaagagctctggtctttgctacatttcattatgccagaa
aagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggttat
gcaagcctccacaaggagcttgagccatttctgttacgcagggttaaaaaagatgtggaa
aaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacagaaa
caatactacaaatggatattaactaggaattacaaagccctcagcaaaggttccaagggc
agtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgctac
ctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacactta
atccgtagtagcggaaaattaattcttcttgacaaactgttaattcgcctaagagagcga
ggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaatat
ttgaagtatcgtcaattcccctttcaaagattagatggatcaataaaaggggagctgagg
aaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttcc
acaagagctggaggtttaggaattaacttagcctcagctgacactgttgttatatttgat
tctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcaa
aagaaacaggtgaacatttatcgtctagttacaaagggatcagttgaagaggatattctt
gaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacacaact
gggaagacagtattacacacaggttctgctccctcaagttctactcctttcaataaagaa
gagttatcagccattttaaagtttggtgctgaggaactttttaaggagcccgagggagaa
gaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcatgaa
aatgaaccaggacctttaactgtaggagatgaattactttctcagttcaaggttgccaac
ttttcaaatatggatgaggatgacattgagttggaacctgaaagaaattcaaagaattgg
gaagaaatcattcctgaagatcaacgaagacgattagaagaggaagaaagacaaaaggaa
cttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttcaat
ggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgattcagtc
tcagaaaggaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaatatt
aaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggtggc
cctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagagaca
gacctcagacgactaggagaattggtacataatggttgcattaaagctttaaaggacaat
tcttcaggaacagaacgaacaggtggtagacttggaaaagtaaagggtccgacattccga
atatcaggagtacaggtgaatgccaagctagtcatctcccatgaagaagaattaataccg
ttgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatcccatgccac
acgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgttaatt
ggtatctacgaatacggatatggaagctgggaaatgattaaaatggatcctgacctcagt
ctgacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacagttacag
acacgtgcggactacctcatcaaattacttagtaaagatcttgcaagaaaagaagctcag
aggctttctggtgcaggaggttcaaaaaggaggaaagtaagagctaagaagaataaagca
atgaagtctataaaaatgaaagaggaaataaagagcgattcttctcccctgccctcagaa
aagtctgatgaagatgatgataagttgagtgaatccaagtctgatagcaaggaaagatct
aagaaatcttcagtgtcagatgctccagttcatatcactgcaagtggtgaaccagttccc
atatctgaagaatctgaagagctagatcagaagacattcagcatatgtaaagaaagaatg
aggcctgtcaaagcagctttgaagcaacttgataggcccgagaaaggcctttcagaaaga
gaacaactggaacatactagacagtgcttaataaaaattggagaccatatcacggaatgt
ctgaaagagtatacaaatcctgagcaaatcaagcagtggagaaaaaacctgtggattttt
gtatctaagtttactgagtttgatgcaagaaaattacataaattatataagcatgctatt
aaaaaacggcaggaatctcagcaaaataatgaccagaacagcaacttgaatactcaagtg
attagaaatccagatgtggaaagattaaaagagaatacaaatcatgatgatagcagcagg
gacagttattcatctgataggcacttatctcaataccatgatcatcataaagaccgacat
cagggagattcttataaaaagagtgactctaggaaaagaccctactcttcttttagtaat
ggtaaagatcatcgtgattgggatcactacaagcaagacagcagatactatagtgataga
gagaaacacagaaaactggatgatcacaggagtagagaccacaggtcaaatttggaagga
agtttaaaagacagaactcattctgatcatcgttctcattcagatcatcggttgcattca
gaccatcggtcaagttctgaatatacacaccataaatcttccagggattataggtatcac
tcagattggcaattggaccatagagcttccagtagtggctctagatcaccactagatcag
aggtctccttatggctccagatctccatttgaacactcagttgaacacagaagtacacct
gagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
