KEGG   Physeter macrocephalus (sperm whale): 102982264
Entry
102982264         CDS       T06011                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102982264 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcad03021]
    102982264 (TAF5L)
   03036 Chromosome and associated proteins [BR:pcad03036]
    102982264 (TAF5L)
Transcription machinery [BR:pcad03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102982264 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     102982264 (TAF5L)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     102982264 (TAF5L)
    STAGA complex
     102982264 (TAF5L)
    TFTC complex
     102982264 (TAF5L)
    SAGA complex
     102982264 (TAF5L)
    SLIK complex
     102982264 (TAF5L)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 RMC1_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_RFWD3 PEP5_VPS11_N PROPPIN WD40_like eIF2A WD_LRWD1 Beta-prop_IP5PC_F Ge1_WD40 Nbas_N Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 102982264
NCBI-ProteinID: XP_007120284
Ensembl: ENSPCTG00005016481
UniProt: A0A2Y9S400
LinkDB
Position
20:complement(1329460..1357209)
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSAEEMATSLAVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSESQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQ
SDNNTALCRVLTWHIHLDVQPAKRTDYQLYASGGPSRGEGGGLEPADVPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEKEDDEDDNAGTEMKVLRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRIWDIR
SAHCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgggtgcgcaccgagcagattcagatggccgtgtcctgctacctcaaacgccgg
cagtacggggacgcggacggcccgctgaagcaaggcctgcggctgtcgcagagcgccgag
gagatggccaccagcctcgcagtccaatcagaatctggttgtgccaacatagtgtctgcg
gcgccttgccaggcagagccccagcaatatgaagtgcagttcggacggctgcggaatttc
ctcaccgattctgaatcccagcacagccacgaagtgatgcctctcctctaccctctcttt
gtctacctccacctcaacctggtccagaacagtcccaagagcacagtggaaagcttttac
agccgcttccatggaatgtttctgcagaatgccagccagaaggacgtcatcgagcagctg
cagaccacccagaccatccaagacatcctgtctaacttccggctgcgggccttcctggac
aacaagtacgtggtccgcctgcaggaagacagctacaactaccttctccgctacctccag
agtgacaataacaccgcgctgtgcagagtcctcacctggcacatccacctggacgtgcag
cccgccaagaggacggactaccagctctacgccagcggcggcccctcccggggcgagggc
ggcggcctggagcctgccgacgtgcccgcgcccatcctgcagaacgaggccgcgctggag
gtcctgcaggagagcattaagcgtgtcaaggacggccccccttctctcaccaccatctgc
ttctacgccttctacaacacggagcagctgttgaacacggcggaggtctccccggacagc
aagctgctcgccgctggctttgacaactcctgtataaaactgtggagtctgcgttccaag
aagttaaaatctgaaccccatcaagtagacgtgtcccgcatccacttggcttgtgatatc
ctggagaaggaggacgacgaggacgataacgcaggcacggagatgaaggtcctgcgggga
cactgcgggccagtgtacagcaccaggttccttgcggacagctcagggctgctctcctgc
tctgaggacatgtccatcaggtactgggacctcggcagcttcaccaacaccgtgctgtac
cagggccatgcctaccccgtgtgggacctggacatcagcccgcacagcctgtactttgcc
agtgggtcccacgaccgcacggccaggctgtggtcgtttgatcggacgtacccgctgcgc
atctatgctgggcacctggcggacgtggactgcgtcaagttccaccccaactcaaactac
ttagccacgggctcgaccgacaagacggtccggctgtggagcacccagcaggggaactcg
gtgaggctcttcacgggccaccgcggccccgtgctctctctggccttttcccccaacggt
aagtacttggcgtcggcgggcgaggaccagcggctgaagctgtgggacttggcgtccggg
accctctacaaagagcttcggggccacacggacaacatcaccagcctcaccttcagcccg
gacagcagcctgatcgcgtcggcgtccatggacaactcggtgcgcatctgggacatcagg
agcgcgcactgcagcgcacccgccgatggctcgtccagcgagctcgtgggcgtctacacc
ggccagatgagcaacgtgctgagcgtgcagttcatggcctgcaacctcctgctggtgacc
ggaatcacacaagaaaatcaggaacattga

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