Physeter macrocephalus (sperm whale): 102982322
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Entry
102982322 CDS
T06011
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102982322 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102982322 (APEX1)
Enzymes [BR:
pcad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102982322 (APEX1)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102982322 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
102982322
NCBI-ProteinID:
XP_007127808
Ensembl:
ENSPCTG00005021126
UniProt:
A0A2Y9FNX0
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEATGEGAVMYEDPPDQKTSPGGKSA
TLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQALSGLSHQYWS
APSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEYDAFVLVTAYVPNAGRGLV
RLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPEERQGF
GELLQAVPLTDSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKALGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgtgggaaaaagggagcggtggcagaagacggggaagagcccaagattgag
ccagaggccaagaagagcaaggcgggagcaaaaaaaaatgaaaaagaggcaacaggagag
ggggcagtcatgtatgaggaccccccagatcagaaaacctcacctggtggcaaatcagcc
acacttaagatctgctcctggaatgtggatgggcttcgagcctggattaagaagaaaggt
ttagattgggtaaaggaagaagccccagatatcctgtgcctccaagagaccaaatgttct
gagaacaaactgccagctgaacttcaagcactctctggactatcccatcagtactggtca
gctccttcagacaaggaagggtacagtggtgtgggcctactctcccgccagtgcccactc
aaagtctcctatggcattggtgaagaggaacatgatcaggaaggcagagtgattgtggct
gaatatgatgcatttgtgctggtgacagcctatgtacctaatgcaggccgaggtctggtg
cgcctggagtaccgccagcgctgggatgaagcctttcgcaaattcctgaagggtttggct
tcccgcaagccccttgtgctatgtggggacctcaatgtggctcatgaagaaattgatctt
cgcaacccaaagggaaacaaaaagaatgctggcttcactccagaagagcgtcagggcttt
ggggaattgctgcaggctgtgccactgactgacagtttccggcacctctaccccaacacg
gcctatgcctataccttttggacgtacatgatgaatgcgcgatccaaaaacgttggttgg
cgccttgattatttcttattgtctcactctctgttgcctgctttgtgtgacagcaagatc
cgttccaaggctctgggcagtgaccactgtcccatcaccctatatctagcactgtga
DBGET
integrated database retrieval system
