Physeter macrocephalus (sperm whale): 102982378
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Entry
102982378 CDS
T06011
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102982378 (APEX2)
Enzymes [BR:
pcad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102982378 (APEX2)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102982378 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
102982378
NCBI-ProteinID:
XP_007121712
Ensembl:
ENSPCTG00005018476
UniProt:
A0A2Y9FHG8
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Position
21:complement(35250335..35258317)
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AA seq
515 aa
AA seq
DB search
MLRVVSWNINGIRSPVQGVGYEESSNCTAMAMRRILDKLDADIVCLQETKVTRDVLTEPL
AIIEGCNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATQNGDVGCYGNMDDFT
QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLAFKMRFYRLLQI
RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPSRKWMDHLLSNLGCQAGSHT
GPFIDSYRCFHPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVMDTFQASFLLPEVM
GSDHCPVGAVLSVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVRLEQDPVFRQSALQLS
NQTPVQMRQNKARVRSTRSRPSQAGSSRGQKNLMSYFQPSSSRPQASPNLELPSLGTLVT
PKTSEEDMMANVVEGRAKASQAKDEKEVRTSFWKSLLGGPLPMPLCGGHREPCVMRTVKK
PGPNLGRHFYVCARPQGPPTDPSSRCSFFLWSRPG
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtggtgagctggaacatcaatgggattcggagccccgtgcaaggggtggga
tacgaggagtccagcaattgtaccgccatggccatgaggcgcatcttggacaagctggat
gctgacatcgtctgtcttcaggagaccaaagtaaccagggatgtgctgacagagcccctg
gctattattgagggctgtaactcttatttcagcttcagccgcaaccgtagtggctattct
ggtgtagccaccttctgtaaggacagtgctaccccagtggctgctgaagaaggcctgagt
ggcctacttgccactcagaatggggatgtgggttgctacggaaacatggatgacttcact
caagaggagcttcgagctctggatagtgagggccgggccctcctcacacaacacaagatc
tgcacatgggaagggaaggagaagaccttgaccctaatcaacgtgtactgcccccatgcg
gaccctgggaagcctgagcggctcgcctttaagatgcgcttctatcgcttgctgcagatc
cgagcagaagccctcctggcagctggcagccatgttatcattctgggggacctgaataca
gctcaccgccccattgaccactgggatgcagtcaacctggaatgctttgaagaggaccca
agtcgcaagtggatggaccacttgctcagtaacctggggtgccaggctggttcccatacg
ggacccttcattgatagctaccgatgcttccatccaaagcagaagggggccttcacctgc
tggtccacagtcagtggtgcccgccatctgaactatggctctcggcttgactatgtgctg
ggggacaggaccctggtcatggacacctttcaggcctccttcttgctgcctgaggtgatg
ggctctgaccactgccctgtgggtgcagtcttaagcgtgtcttctgtgccggcaaaacag
tgcccacctctgtgcacccgctttctccctgagtttgcaggcacccagctcaagatcctt
agattcctagttcgtctcgaacaagatcctgtgttcaggcagtcagcgctgcagctcagc
aatcaaacaccggtacagatgcgccaaaacaaagcccgtgtgcgctcaaccaggtctcgg
ccaagtcaagctggttccagtagaggccaaaaaaacctgatgagctacttccagccatcc
tccagtcgtccccaagcttctcctaacttggagcttcctagcctgggcaccctcgtgacc
ccaaagacctcagaagaagacatgatggccaatgtggtggaggggcgggccaaggcttca
caggccaaggatgaaaaggaggtacggacctcattctggaagtctctgctgggggggccc
ttgcccatgcccctgtgtgggggccacagggagccatgtgtaatgcgaactgtgaagaag
ccaggacccaacctgggccgccacttctacgtgtgtgccaggccccagggtcctcccact
gacccctcctcccgctgcagcttcttcctctggagcaggcccggctga
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