Physeter macrocephalus (sperm whale): 102982531
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Entry
102982531 CDS
T06011
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102982531 (GAPVD1)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102982531 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
102982531
NCBI-ProteinID:
XP_007117696
Ensembl:
ENSPCTG00005011724
UniProt:
A0A2Y9F911
LinkDB
All DBs
Position
9:complement(1993246..2060907)
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AA seq
1460 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGEKGS
DRFRQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTRSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYITYSQLITLVNF
MKSVMSGDQLREDRMALDNLLANLPQAKPGKSSSLEMTPYSTPQLSPATTPANKKNRLPI
ATRSRSRTNVLMDLHMDHEGSAQETIQEVQPEEVLVISLGTGPQITPGMMSENEVLNMQL
SDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDEVTHGAHQLTSPPSQSESLLAMFDPLSSHEGASAV
VRPKVHYARPSHPPPDPPILEGAAGGNEARLPNFGSHVLTPAEMEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPSWNRRPGNEERELPQAAAIGATSLVAAPHSSSSSPSKDSSRGET
EERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDLGPDRFSTLTDDPSP
RLSAQAQVAEDILDKYRNAIKRTSPSEGALANYESAEVMGDGESAHDSPRDETLQNISAD
DLPDSASQAAHPQDSAFSYRDAKKKLRLALCSADSVAFPVLTHSTRNGLPDHTDPEDNEI
VCFLKVQIAEAINLQDKNLMAQLQETMRCVCRFDNRTCRKLLASIAEDYRKRAPYIAYLT
RCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAA
DDKTAQVEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDI
LRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCIL
RMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYASCLSGEES
YWWMQFTAAVEFIKTIDDRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatattcatactctggcccatcacctcaagcaggaacgcttatatgta
aactctgagaaacagctcattcagaggctcaatgcagatgtacttaagacagctgaaaag
ttgtatcgtacagcatggatcgctaagcaacagagaattaatttggatcggcttattata
accagtgctgaagcttcccctgctgaatgttgccaacatgccaagattttggaagataca
cagtttgttgatgggtataagcagttgggatttcaggagactgcttatggagaattctta
agtcgattaagggaaaatcctcgtcttattgcctcctctttggttgctggagagaaactt
aatcaggagaacacacaaagtgttatttacacagtttttacctctctctatggcaactgc
attatgcaagaagatgaaagctacctccttcaggtgttgagatacttgattgaatttgaa
cttaaagaaagtgacaaccccaggcgacttttgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttctgccaaacttttcctcacagccacttta
catgagccaatcatgcagctgcttgttgaagatgaggatcacctggaaacagacccaaac
aagctaattgagaggttctccccatctcaacaggaaaaactctttggagagaaaggctca
gatagattcaggcaaaaggttcaagagatggtggattccaacgaggccaaactagtggct
ttggtgaacaaatttattggttatctcaaacagaacacatactgctttccacatagtttg
agatggattgtgtcacagatgtacaaaactctctcctgtgtagatagactggaagttggg
gaggtcagagcaatgtgtactgacctcctgttggcgtgcttcatttgtcctgcggttgtc
aatccagaacagtatggaataatttctgatgctcctattaatgaggtggcaagatttaat
ctgatgcaggttggccgccttttgcagcaattagcaatgactggctccgaagagggagat
ccccggacaaggagcagccttggaaaatttgacaaaagctgtgttgctgctttccttgat
gtggtgattggaggccgtgcagtggagaccccgccaatgtcctctgttaatcttctggaa
gggttgagcagaactgtagtttatataacctacagtcagcttattactctggtgaatttt
atgaagagtgtgatgtctggagatcaactgagagaagatagaatggctcttgacaattta
ttggcaaacctaccccaggcaaagccaggaaaaagcagcagcttggaaatgactccctac
agtactcctcagctgtctccagcaaccactccagcaaataaaaagaatcgattgcctata
gcaactcggagcagaagccgcaccaatgttctaatggacttgcatatggaccatgaagga
tcagctcaagaaaccatccaggaagtgcaaccagaagaggtgttggtcatttccttagga
acaggtccccagattactccagggatgatgtcagaaaatgaggtcctaaacatgcagctt
tcggatggaggacaaggagatgtccctgtcgatgaaaacaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgttctaattcagtatcctcactagacctggaaggggaatctgtatcagaacttgga
gcaggaccttctgggagtaacggagttgaagctctacagctgttagagcatgagcaagct
acaacccaggataatctcgatgataagctaaggaagtttgaaattcgtgacatgatggga
ctgacagatgatagggatatatcagaaacagtgagtgagacgtggagtacagatgtcttg
ggaagtgattttgaccctaacattgatgaagatcgcttgcaagaaatcgcaggtgcagca
gcagagaacatgttaggcagtttactgtgcctgccaggttcagggtcagtgcttcttgac
ccctgcactggttctaccatatcagaaacaacaagcgaagcttggagtgtagaggtattg
ccaagtgactcagaggccccagatctaaagcaggaggaacgactacaagaactggagagc
tgttcaggactgggtagcacatctgatgatacggatgtcagggaggtcagttcccgcccc
agcacaccaggcctcagtgttgtgtcgggcataagtgcaacctctgaggatattcccaat
aagattgaagacctgagatctgagtgcagctctgattttgggggtaaagattctgtcact
agtccagacatggatgaagtaactcatggtgcccaccagctgacctctcctccttctcag
tcagagtctctccttgccatgtttgatccgctgtcttcacatgaaggggcttctgctgta
gtaaggccaaaggttcactatgccaggccatcgcatccaccaccagatcccccaatcctg
gaaggagctgcaggaggaaacgaggccaggttgccaaacttcggttcccatgtcttaact
ccagctgagatggaggcatttaagcaaaggcattcttaccctgagagattagttcgcagc
aggagctctgatatagtgtcttctgtccggcgacctatgagtgaccccagctggaaccga
cgtccagggaatgaagagcgagaactcccccaagccgcagccattggtgctacttctttg
gtggctgcaccacattcatcatcttcgtccccgagtaaggactcctcaagaggagagact
gaagaacgcaaagatagcgatgatgagaaatcagacaggaacagaccttggtggagaaag
cgttttgtttctgccatgcccaaagctcctataccatttagaaagaaagaaaaacaagaa
aaagacaaagatgatctggggcctgacagattctcaacactcacagatgacccgagccct
agactcagtgcacaagctcaggttgctgaggatattctggacaaatacaggaatgccatt
aaacgaaccagtcccagtgaaggagcactggcaaactacgaaagtgcagaagttatgggt
gatggtgaaagtgcgcacgattcgcctcgtgacgaaaccctgcaaaacatctcagctgac
gatctcccagattccgcaagccaagccgcccaccctcaggattcagctttctcttacaga
gatgcaaaaaagaaactgaggcttgctctttgttctgcggattctgttgctttcccagtg
ctaacccattcaacaaggaatggtttaccagaccatacagacccagaagacaatgaaatt
gtctgcttcctaaaagttcaaatagctgaagcaattaatttacaagataaaaacttaatg
gctcaacttcaagaaacaatgcgttgtgtgtgccgctttgataacaggacttgtaggaaa
ctactggcttctatcgctgaggactataggaaaagggccccctatattgcttacctcact
cgttgtcgacaaggactgcagaccacgcaggctcacctggaaaggctactgcaaagggtt
ttgcgggacaaagaggtggccaatcgatacttcaccactgtctgtgtgaggttgctgctt
gagagcaaagaaaagaagatcagggaattcattcaagactttcagaaactcacagcagct
gatgataaaactgctcaggtggaagattttctgcagttcctttatggcgccatggcccag
gatgtcatatggcagaacgcgagtgaagagcagcttcaggatgctcagctcgccatcgag
cgaagtgtgatgaatcggatcttcaaacttgccttctaccctaatcaggatggggacata
ctccgtgaccaagttcttcatgaacatattcagagattgtctaaagtagtgactgcaaat
cacagagctcttcagataccagaggtttatcttcgggaggcaccgtggccatctgcacag
tcagaaatcaggacgataagcgcttacaagacgccgcgggacaaagtgcagtgcatcctg
agaatgtgctccacgatcatgaacctcctgagcctggccaatgaggactccgtcccagga
gcagatgacttcgtccctgttttggtttttgtgttgataaaggcaaatccaccctgtttg
ctgtccactgttcagtacatcagtagcttttatgccagctgtctgtctggagaggagtct
tattggtggatgcagttcacagcagcagttgaattcattaagactatcgatgaccgaaag
taa
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