Physeter catodon (sperm whale): 102982848
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Entry
102982848 CDS
T06011
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102982848 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102982848 (POLR1A)
Enzymes [BR:
pcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102982848 (POLR1A)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102982848 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
102982848
NCBI-ProteinID:
XP_023985669
Ensembl:
ENSPCTG00005021140
UniProt:
A0A2Y9TC94
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEACSTCVQDFSSCPGHLGHIELPLTVYNPLLFEKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENADPTAFEIQEELERYTTKILQNNLLGSHGAH
VKNVCESRSKLIAFFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAVVHRKADQKDT
EPQGIEEAQMGKRGYLTPTSAQEHLTALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPAA
NEEKDPSIAMDQSFLSLLPGQSLTDKLYNVWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYIDTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPSVHPGASMVINEDGSRTALSASNLTQREAVAKQLLTPAMGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFSREQYMEMVYRG
LTDRVGRVKLFPPAVLKPCPLWTGKQVVSTLLINIIPEDHVPLNLSGKAKIGGKAWVKES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHRIIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFKAIKKWQSKHS
NTLLRKGAFLNYSQKIQAAVKALNLEGANQNGRSPETHQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKVDDYSREWAAQAEESYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFSMGEKQNKFRVYQLRFQ
FLPHAYYQQEKCLRPEDILHFMETRFFKILMESIRKKNSKASAFRSVNTRRASQRDLDNA
GESERSRGEQEGDEEEDGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEDEDDEDL
QEEEAAPGEGIPEAQAQEEEGGSGPEEDSLPAAPLTQPRRPTRSREPQGAEEVERRVRAV
RECHPFVEDYQYDTQGGLWCQVMVKLPLIKVNFDMSSLVVSLAQGTVVYATKGITRCLLN
ETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVIEKEI
KDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETGFQFLKQAT
MMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagagctcaagaaattaagcgttaagtccattacaaaccctcggtacctggat
agcctggggaacccgtcggtgaacggcctgtacgatctagctctgggccccgcggactcc
aaagaggcgtgttccacctgtgtgcaggacttcagcagctgccccgggcacctgggccac
atcgagctcccgctcactgtgtacaaccctctcctcttcgagaaactctaccttctgctc
cggggttcctgtttaaattgtcacatgctgacttgcccccgggctgtcgttcacctgctg
ctctgccagctgagagttctggaagtcggggccctacaagcagtgtacgagctggagaga
attctgtacaggtttctggaagaaaatgctgatcctactgccttcgaaattcaggaagag
ttagaacgatatacgaccaaaatcctgcagaacaacctcctgggatcccacggggcacat
gtaaaaaatgtctgtgagagcaggagcaaactcattgctttcttctggaaggcacatatg
actgctaaacggtgtccccactgcaaaaccgggcggtcagttgtccgaaaggagcacaac
agcaaactgacaatcacatatccggccgtggtgcacaggaaagctgaccagaaggacact
gagccccagggaattgaggaagctcagatgggaaaacgaggatacttgacacccaccagc
gctcaagaacatctcacggctctttggaagaatgaaggattctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccagattcaatcccagtatgttctttctggat
ttcttggtggtgccgccctcaaggtatcgccctgtcagccgcctcggggaccagatgttc
accaacggccagacggtgaacctgcaggctgtcatgaaggatgtggttctgatccgaaag
cttctggccttgatggcccaagaacaggagctgccaagtgaggtggcagcacccgccgca
aatgaggaaaaagacccttcgatcgctatggaccagtcctttttgagtctacttccaggc
cagtccctcacagacaaactttacaacgtttggattcgccttcagagccacgtcaatatt
gtgtttgatagcgagatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggtttattccggaagcacatgatgggaaagcgagtagactatgca
gcccgctcagtcatctgcccggacatgtacatcgacaccaatgaaattggaattcccatg
gtgtttgccacaaagctgacctacccacagccagtcaccccctggaacgttcaggagctg
aggcaggcagtcatcaacggccccagcgtgcacccaggagcctccatggtcatcaacgag
gatggtagccgcacggccctgagcgcctcgaacctaacccagcgggaagccgtggccaaa
cagctcctgacaccagccatgggggcacctaagccccaggggacaaaaattgtgtgccgg
cacgtgaagaatggggacattctcctcctgaaccgacagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcatcctgcccgaggagaaagtcctgcggctccactatgcc
aactgcaaggcctacaacgccgactttgatggagacgagatgaacgcccacttccctcag
agtgaactgggccgggccgaggcctacgtcctggcctgcacggatcagcagtaccttgtt
cccaaggatggccagccattggcagggctgatccaagatcacatggtttcgggtgcaaac
atgaccattcgaggctgctttttcagccgggagcagtatatggagatggtgtaccgagga
ctcacagacagagtggggcgtgtgaagctgtttcctcctgccgtcctgaagccctgtccg
ctgtggacaggaaagcaggttgtgtctacactgctcatcaacataatcccagaggatcac
gtcccactgaacttgtcaggaaaggcgaagattggcgggaaggcctgggtgaaggagtct
cctcggcccgttcccggctttaaccccgactccatgtgtgagtcccaggtgatcatcagg
gaaggggagctgctctgcggggtgctggacaaggcgcattacgggagctccgcctacggc
ctggtccactgctgctacgagatctacggcggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcactttgggcgtggaa
gacattttggtcaagccgaaggcagatgtcaggagacacaggatcattgaagagtccacc
cactgtgggccccgggctgtcagggctgcgttaaaccttccagaagcggcatcgtgtgat
gaggtcagagggaagtggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgaaattaacaaggcatgc
atgcctttcggcctgcacagacagttcccagagaacaacttgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaataccatgcagatctcgtgcctgctgggccagatcgaa
ctggaaggtcggagacccccgctgatggcatctggcaagtcactgccctgcttcgagcct
tatgagttcacccccagggctggcggcttcgtcactggcagattcctcaccggcatcaag
cctcctgagttcttcttccactgcatggccgggcgagagggtctggtggacaccgctgtg
aagaccagccgctccggctacctccaaaggtgcatcatcaagcacctggaggggctggtc
gtccagtacgacctgacggtccgcgacagcgacggcagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctc
gccagcaactatgaggtgataatgaaatcgaagcacctccatgaagttttatccagagca
gatccccagaaagctctccgccacttcaaagccatcaaaaaatggcaaagcaagcattcc
aacaccctgctgagaaaaggcgccttcttgaattattcccagaaaattcaagcagctgtg
aaagccttgaacctcgagggcgcgaaccagaacggccgcagccccgagactcaccagatg
ttgaggatgtgggctgagttagatgagcaaagccggaggaaataccagaagaaggcggct
ccttgtcctgaccccagtctgtctgtctggcgcccagacatctactttgcatcagtgtca
gaaacatttgaaaagaaggtggatgactacagtcgcgagtgggcagctcaagcagaggag
agttacgagaaatcggagctctcgctggacaggttgaggactcttctgcagctgaagtgg
cagcgctcgctgtgtgacccgggagaggccgtgggcctgctggccgcacagagcatcggg
gagccctccacacagatgaccctgaacaccttccactttgccggcagaggcgagatgaat
gtcaccctgggcattcccaggttgagggagattctcatggtggccagcgccaacatcaag
acgcccatgatgagcgtgcctgtgttcaacaccaagaaagcgctgaagaaagtgaaaagc
ctgaagaagcagctcaccagggtgtgcctcggggaggtgttggagaaaattgatgtccag
gagtccttctctatgggggagaaacagaacaagttccgggtgtaccagctgcggtttcag
ttcctgccacacgcgtactaccagcaggaaaagtgcctgagacccgaggacatcctgcat
ttcatggaaacaagattctttaagattctgatggaatccatccgaaagaagaatagtaaa
gcatcagctttcagaagcgtaaacacgcggagagctagccagcgggatctagacaacgca
ggcgagtcggagaggagtcggggagagcaggaaggtgacgaggaagaggacgggcacatt
gtggacgccgaagccgaggagggagacgctgatgcctcggacgccaaacgcaaggagaag
caagaggaggaggtcgattacgagagtgaggaggaggaggacgaggacgacgaggacctg
caggaggaagaggccgcccccggggaaggcattcccgaggcccaggcgcaggaggaggag
gggggctcaggccccgaggaggactcgctccccgccgcccccctgacgcagccgcggagg
cccacccgcagccgggagccccagggcgccgaggaggtggagcgccgggtgcgggccgtg
cgcgagtgccacccgttcgtagaggactaccagtacgacacccagggcggcctgtggtgc
caggtgatggtgaaactccctctcatcaaggtcaactttgacatgagctccctggtagtg
tccctggcccaaggcaccgtcgtctacgcgaccaagggcatcacgaggtgcctgctgaac
gaaaccaccaacagtaagaacgagaaggagctcgtcttaaacacagaaggcatcaacctc
ccggagctgttcaagtacgccgaggtcctggatttgcgccgcctctattccaatgacatc
catgccatggccagcacgtacggcatcgaggccgcgctgcgggtgatcgagaaggagatc
aaggatgtgttcgccgtgtacggcatcgccgtcgacccccgccatctctccctggtcgct
gactacatgtgcttcgagggtgtttacaagccactgaaccgctttgggatccggtcgaac
tcctccccactgcagcagatgacgtttgagaccggcttccagtttctgaagcaggccacc
atgatgggatcccacgatgagctgaggtccccgtcagcctgcctcgtggtcgggaaggtc
gtcaagggcgggacgggcctcttcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system
