Physeter catodon (sperm whale): 102982890
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Entry
102982890 CDS
T06011
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04625
C-type lectin receptor signaling pathway
pcad04668
TNF signaling pathway
pcad04917
Prolactin signaling pathway
pcad05133
Pertussis
pcad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
102982890 (IRF1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102982890 (IRF1)
09152 Endocrine system
04917 Prolactin signaling pathway
102982890 (IRF1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102982890 (IRF1)
09171 Infectious disease: bacterial
05133 Pertussis
102982890 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102982890 (IRF1)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
102982890 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
102982890
NCBI-ProteinID:
XP_007110770
Ensembl:
ENSPCTG00005005916
UniProt:
A0A2Y9EX73
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All DBs
Position
8:complement(129018358..129025494)
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AA seq
322 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDAKSKAKKKSCGESSPDTFSDGLSSSTLPDDHSSYTTQGYMGQDLDVERAL
TPALSPCAVSSTLPDWRIPVEIVPDSTSDLYNFQVSPMPSTSEAATDEDEEGKLTEDIMK
LLEQSGWQQTSVDGKGYLLNEPGAQPTSVYGDFSCKEEPEVDSPGGYIGLISSDLKNMDT
SWLDSLLPPVRLPSIQAIPCAP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcggatgcgcatgagaccctggctagagatgcagattaattccaaccaa
atcccagggctgatctggattaataaagaggagatgatcttccagatcccatggaagcac
gctgccaagcatggctgggacatcaacaaggatgcctgtctgtttcggagctgggccatt
cacacaggccgatacaaagcaggggaaaaggagccggatcccaagacatggaaggccaac
tttcgctgtgccatgaactccctgccagatatcgaggaggtgaaggaccagagcaggaac
aagggcagttcagctgtgcgggtgtaccggatgctcccacccctcaccaagaaccagagg
aaagagagaaagtccaaatccagccgagatgctaagagcaaggccaaaaaaaagtcatgt
ggggaatccagccccgataccttctctgatggactcagcagctccaccctgcctgatgac
cacagcagctacacaactcagggctacatggggcaggacttggacgttgaacgggccctt
actccagcactgtcaccgtgtgccgtcagtagcaccctccccgactggcgcattccagtg
gaaattgtgccagacagcaccagtgacctgtacaactttcaggtgtcgcccatgccctcc
acctctgaagctgcaacagatgaggacgaggaagggaaattaacggaggacatcatgaag
ctcttggagcagtcagggtggcagcagacaagcgtggatgggaaggggtacctgctcaat
gaacctggggcccagcccacctctgtctatggagacttcagctgcaaggaggagccagaa
gttgacagccctggggggtatattgggctgatatcttcagatctgaagaacatggacacc
agctggctggacagcctgctgcccccagtcaggctgccctccatccaggccattccttgt
gcaccatag
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