Physeter macrocephalus (sperm whale): 102983032
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Entry
102983032 CDS
T06011
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102983032 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102983032 (DDX42)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102983032 (DDX42)
Spliceosome [BR:
pcad03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102983032 (DDX42)
Complex B
102983032 (DDX42)
Complex C
U2 SnRNP specific factors
102983032 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
102983032
NCBI-ProteinID:
XP_023985809
Ensembl:
ENSPCTG00005012358
UniProt:
A0A2Y9TCM5
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All DBs
Position
14:120831501..120894566
Genome browser
AA seq
811 aa
AA seq
DB search
MKRLEEKDKERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPI
APSKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPR
PGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWP
MLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQA
KALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRP
DRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHSGPSKWNWLTR
RLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIP
VLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFA
GDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSEN
TDRGSNNNVMSNYEAYKPSTGAMGDRLTAMKAAFQSQYKSHFVAASLSNQKAGSSAAGAS
GWTSAGSLNSVPTNSAQQGHNSPDSPIASATKGIPGFGSTGNLSSAPVTYPSAGAQGVNN
TASGNNSREGIGGGNGKRERYTENRGGSRHSHGESGNRHGDSPRHGDGGRHGEGYRYPES
SSRHADGRRHADGHPHGENRHGGGGGRHGESRGANDGRNGESRKESCNRESKMDPKVDST
KMDKMDSKTDKTTDGFAVPEPPKRKKSRWDS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcttgaagaaaaggacaaggaaagaaaaaacgtaaagggtattcgagatgac
attgaagaggaagatgaccaagaagcttattttcggtacatggcagagaatccaactgct
ggtgtggttcaagaggaggaggaggataatttggagtatgatagtgatggaaatccaatt
gcaccttccaaaaaaatcattgatcctcttcctcccattgatcattcagagattgactat
ccaccatttgaaaaaaatttttacaatgaacatgaagagataaccaacctcaccccacag
cagctaatagatctccggcataagctcaatcttcgggtttctggtgctgcacctcctaga
ccaggaagtagttttgctcattttgggtttgatgaacaacttatgcaccagattcggaaa
tctgagtacactcagcccactccaatacagtgccagggtgtacctgtggcattaagtggt
agagacatgattggtattgcgaaaacaggcagtgggaaaactgcggcctttatctggccc
atgttgattcatataatggaccagaaagaattggaaccaggtgatggaccaattgcagtg
attgtgtgtcctactagggagctttgtcagcagatccacgcagaatgcaagcggtttgga
aaagcatataatctccgatcagtggccgtgtatggaggagggagcatgtgggagcaggcc
aaggcccttcaggaaggggcagagattgttgtctgtacaccaggtcgacttattgatcat
gtgaagaagaaagctaccaaccttcaaagagtctcttaccttgtatttgatgaagcagat
cgaatgtttgacatgggatttgagtaccaggtgcgatccatagcaagtcatgtccgtcct
gacagacagactctcttattcagtgcaacttttcggaaaaagattgaaaaactggccaga
gacatcctgattgaccctattcgtgtggtgcagggggatattggagaggcaaatgaagat
gtgactcagattgtggagattctgcattctgggcctagtaaatggaactggctcactcgg
cgtctagtggagtttacctcttcaggaagtgtcctcctgtttgttactaaaaaagccaat
gctgaagagctagccaataaccttaaacaggagggtcataatcttggcctgctccatggt
gacatggatcagagtgaaagaaacaaggttatttcagactttaagaaaaaggacatccca
gtcctagtggccacagatgttgcagcccgtggtctggacattccttcaattaagactgtc
attaactatgatgtggcacgagatattgatacccatactcacaggattggccgaacagga
cgagctggtgagaaaggcgtggcctataccttgctgacacccaaggatagcaattttgcc
ggtgaccttgtccggaacttggaaggagccaatcagcatgtttccaaggaactcctagat
ctggccatgcagaatgcctggtttcggaaatcccgcttcaaaggagggaaagggaaaaag
ctgaacattggtggaggaggcctaggctacagggagcggcctggcctcggctctgagaac
acggaccgaggaagtaacaacaatgtaatgagcaattatgaggcctacaagccctccaca
ggagccatgggagatcggctgacggcaatgaaagcagctttccagtcacagtacaagagt
cactttgttgctgccagtttaagcaaccagaaggctggaagctctgctgctggggcgagt
ggatggactagtgcagggagcttgaattcagttccaactaattcagcccaacagggccat
aacagtcctgacagccccattgccagtgccacaaagggcatcccaggctttggcagtact
gggaacctcagcagcgccccagtgacctatccttctgccggagcccagggagtcaacaac
acagcttcagggaataacagccgagaagggattgggggtggcaatgggaagagagagaga
tacactgagaaccggggtggaagccgtcatagtcacggagagagtgggaatcggcatggc
gatagcccacgtcatggagacggtggtcgccatggagagggataccgctacccagaaagc
agcagccgtcatgctgacggccgccgtcatgctgatggccatcctcatggagagaacagg
catggaggaggtggaggcagacatggggagagccgaggtgcaaacgatggtcggaatggt
gaaagcaggaaagaaagttgtaatcgtgaaagcaagatggaccccaaggtggacagcacc
aagatggacaagatggacagcaagacagataagactactgatggcttcgctgtccccgag
ccacccaagcgcaagaaaagtcgatgggacagttaa
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