Physeter macrocephalus (sperm whale): 102983190
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Entry
102983190 CDS
T06011
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102983190 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102983190 (USP39)
Spliceosome [BR:
pcad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102983190 (USP39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102983190
NCBI-ProteinID:
XP_023985660
Ensembl:
ENSPCTG00005004522
UniProt:
A0A2Y9TA00
LinkDB
All DBs
Position
12:10407250..10437194
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AA seq
565 aa
AA seq
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MSGRSKRESRGSTRGKRESESRSSSARVRRERDRERETEAPSSRGSPVRVKREVEPASAR
EALAPVVPAVRVKREREADEDSEPEREVRAKNGRMDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtccaagcgggagtcccgtggttccacccgcgggaagcgcgagtccgag
tcgcggagcagctcggctcgtgtcagacgggagcgagatcgggagcgggagaccgaggct
ccgagctcccggggcagtccggtgcgcgtgaagcgggaggtcgagccggcgagcgcgcgc
gaggccctggcgcccgtggtcccggcggtgcgggtgaagcgggagcgcgaggccgacgag
gactcggagcctgagcgggaggtgcgagcaaagaatggccgcatggattctgaggatcgg
aggagccgccactgcccctacctggataccattaacaggagtgtgctggactttgacttt
gagaaactgtgttccatctccctctcgcatatcaatgcgtatgcctgtctggtgtgtggc
aagtactttcagggccggggtttgaagtctcatgcctacattcacagtgtccagtttagt
caccatgtcttcctcaacctccacaccctcaagttttactgcctcccagacaactatgag
atcatcgattcctcgctggaggatatcacgtatgtgttgaagcccactttcacaaagcag
cagatcgctaacttggacaagcaagccaagttgtcccgggcatatgatggcaccacttac
ctgcctggtatcgtgggcctgaataacataaaggccaacgactatgccaatgccgtcctt
caggctctgtctaacgttcctcctctccgaaactactttctggaagaagacaattataag
aacatcaagcgtcctcccggggatatcatgttcttgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtctctccccatgagatgctt
caagctgttgtcctttgcagcaagaagacttttcagatcaccaagcaaggggatggagtc
gactttctctcctggtttttgaatgctctacactcagctctggggggcacaaagaagaaa
aaaaagactattgtgactgatgttttccaggggtccatgaggatcttcaccaaaaagctt
cctcatcctgatttgccggcggaagaaaaagagcagctgctccataacgatgagtaccaa
gagacgatggtggagtccacgtttatgtacctgacgctggaccttcctactgcccccctc
tacaaggacgaaaaggagcagctcattatcccccaggtgccgctgttcaacatcttggcc
aagttcaacggcatcactgagaaggaatataagacttacaaggagaactttctgaagcgc
ttccagctcaccaagctgcctccatatttaatcttttgtattaagagattcactaagaac
aatttctttgtggagaagaatccgactattgtcaacttccctattacaaatgtggatctg
agagagtacttgtctgaggaagtacaggcggtgcacaagaataccacctacgacctcatc
gccaacattgtacacgacggcaagccctctgagggctcctaccggattcacgtgcttcat
catggcacaggcaaatggtatgaattacaggacctccaggtgactgacatccttccccag
atgatcacactgtcggaggcttacattcagatttggaagaggcgagataacgatgaaacc
aaccagcagggggcttga
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