KEGG   Physeter macrocephalus (sperm whale): 102983382
Entry
102983382         CDS       T06011                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pcad  Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pcad01009]
    102983382 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcad03036]
    102983382 (KDM5B)
Enzymes [BR:pcad01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102983382 (KDM5B)
Protein phosphatases and associated proteins [BR:pcad01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102983382 (KDM5B)
Chromosome and associated proteins [BR:pcad03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102983382 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN zf-PHD-like PHD_2
Other DBs
NCBI-GeneID: 102983382
NCBI-ProteinID: XP_023986390
Ensembl: ENSPCTG00005003840
UniProt: A0A2Y9TC28
LinkDB
Position
4:90027..169291
AA seq 1539 aa
MEAPGPRPAPALGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVR
PPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVER
KILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLF
LSGDSLRCLQKPNLTTDTKDKEYKPHDIPQRQSVQPLETCPPARRAKRMRAEAMNIKIEP
EETAEARTHNLRRRMGCPAPKCENEKAGKNSLKPEPAERKECVTESEKEKPRSRAKKTTS
AVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQ
EAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEY
GADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLP
WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLETVMKRLAPELFISQ
PDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTV
DWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKAL
RETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSC
PPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEE
SEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTVNELRQF
VSQLHALPCVLSQTPLLKGLLTRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEFDVELP
QLAEMRVRLEQAHWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMARLQELL
TVSEHWDDKARSLLKARPRHSLNSLATVVKEIEEIPAYLPNGAALKDSVQRARDWLQDVE
ALQAGGRVPVLDTLIELVTRGRSIPVHLNSLPRLESLVAEVHVWKECAANTFLTDNSSYS
LLEVLCPRCDIGLLGLKRKQRKLKEPLPSGKKRSPRVESLSDLERALTESRETASAMATL
GEARLREMEALQSLRQANEGKLLSPVQDVEMKVCLCQKAPAAPMIQCELCRDAFHTGCVA
VPSITQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHR
ARQLLSSGNLQSMQERAGSGLLCGRWQAAAGQAPETSKLSQPPGSTSFSLPDDWDNRTSY
LHSPFSTGRSCIPLHGLSPEVSELLMEAQLLQVSLPEIQELYQTLLAKPSPAQQADRGSP
VRPSSEKSDGCRAKRDGVGGLESKLKRRLEREGLSAERWERVAKTRTPKKKRIKLSRRKD
TNSFKLERARGSELVPSADTQSLPSDTSCSEQEASEDEDAVCPAASCLQPEGDEVDWVQC
DGSCNRWFHQVCVGVSPETAEEEDYVCACCAATDAPGRR
NT seq 4620 nt   +upstreamnt  +downstreamnt
atggaggcccctggcccgcgccccgcgccggccctcggcggccccggcccgctgggcgag
ttcctgccgccgcccgagtgcccggtcttcgagcccagctgggaggagttcgccgaccct
ttcgccttcatccacaagattcggcccatagccgagcagaccgggatctgcaaggtgcgg
ccgccgccggattggcagccaccatttgcatgtgatgttgacaaacttcattttacccca
cgtatccagaggctgaatgaattggaggctcaaactcgtgtgaaattaaatttcttggac
cagattgcaaagtactgggaattacagggaagtactctgaaaattccacatgtggagagg
aagatcttggacttgtttcagcttaataagttagttgcagaggaaggtggatttgcagtt
gtttgcaaggatagaaaatggaccaaaattgccaccaagatggggtttgctcctggcaaa
gctgtgggctcccatatcagagggcattatgagcgaattctcaacccctacaacttattc
ctttctggagacagtttgaggtgtctgcagaagccaaacctgaccacagacacaaaggac
aaggagtacaaaccccatgatattccccagaggcagtctgtgcagcccttggaaacgtgt
cccccagctcgacgagcaaaacgcatgagagccgaggccatgaatattaaaatagaacca
gaagagacagcagaagccagaactcataacctgagacgtcgaatgggatgtccagctcca
aagtgtgaaaatgagaaagccgggaaaaacagcctcaagccggagcctgccgagcggaag
gagtgcgttacagagagcgagaaggagaagcccaggagtcgagcgaaaaaaaccaccagt
gctgttgacctgtatgtctgcctcttgtgtggcagtggcaacgatgaggaccggcttctc
ttgtgtgatgggtgtgatgacagttaccacaccttctgcctgatcccgccgctccatgat
gttcccaagggagactggaggtgtcctaagtgtttggctcaggagtgcagtaagccacaa
gaagcatttggctttgaacaggcagccagggactataccctccgtacttttggggaaatg
gcagatgcgttcaaatctgattacttcaacatgccagtccatatggttcccacagaactg
gttgagaaagaattttggcgactggtgagcactattgaagaggatgttaccgtggaatat
ggagctgatattgcctcgaaggagttcggcagtggcttcccggtccgagacgggaaagtg
aagctctcgccggaggaggaggaatatcttgacagtggctggaatttgaacaacatgcca
gtgatggagcagtctgtcctcgctcacatcaccgctgacatatgcggcatgaagcttcct
tggttgtacgtgggaatgtgcttttcttccttctgttggcatattgaagaccactggagc
tattccattaactacctgcactggggtgagccaaagacctggtatggagtcccagggtac
gccgccgagcagctggagaccgtgatgaaaaggctggccccggagctcttcatctcccag
cccgacctcctccaccagctcgtcaccatcatgaaccccaataccctgatgactcacgaa
gtgcctgtttaccgaactaatcagtgtgctggggagtttgtgatcacatttccaagagcc
taccacagcggtttcaatcaaggttttaatttcgctgaggccgttaacttctgcactgtc
gattggctgcccttaggccgacagtgcgtggagcattaccgcctgctgcaccgctactgt
gtattttcccatgacgagatgatttgcaagatggcctccaaggcggacgtactagacgtt
gtagtggcatcaactgttcagaaagacatggccattatgattgaggacgagaaggctcta
agggaaactgttcgtaaattgggagtaattgattcagaaagaatggattttgagctgttg
ccagatgatgagcgtcagtgtgtaaaatgcaaaaccacatgcttcatgtctgccatctcc
tgttcttgtaaacctggcctgcttgtttgcctgcatcacgtaaaggagttatgttcctgt
cctccttataaatataaactgcggtatagatacactctggatgatctctaccccatgatg
aatgcactgaagcttcgagcagaatcttacaacgaatgggccttgaatgtgaatgaagct
ttggaggcgaagattaataagaagaaaagccttgtcagctttaaggctttgattgaggag
tctgagatgaagaaattcccggacaacgatcttttacgtcatctccgcttagtgacacag
gacgcggagaaatgtgcctctgtcgcccagcagctgcttaacggcaagaggcagacgagg
tatcgatctggtggagggaaatcccacaatcagttgacagtgaatgagctccgacagttc
gtgagccagctgcacgccctgccctgtgtcctcagtcagacgccactgctgaagggtctc
ttgactcgtgtagaagatttccagcagcatagccagaaattgctctctgaggagatgccc
agtgccgctgagctgcaagacttgctggacgtcagctttgaatttgatgtcgagcttccc
cagcttgctgagatgcgtgtccggctggagcaggcccattggctggaggaggtgcagcag
gcttgcctagaccccagctccctcaccttagatgatatgagacgtctcatagacctgggc
gtgggtctggccccgtattcagctgtggagaaggctatggcacggcttcaggaattgctt
acggtatcagagcactgggatgacaaagccaggagtctcctcaaggccaggcctcggcat
tcgttgaacagccttgctacggtggttaaggagatcgaggagatccccgcgtacctgccc
aatggtgcggctctgaaagactctgtgcagagagccagagactggcttcaggacgtagag
gccctgcaggctggaggacgtgtgccggtgttagacacactgatagaacttgttacacga
ggccgatctatcccggtgcatctgaattctttaccgagactggagtcactagtagctgag
gttcacgtttggaaagaatgtgctgctaatacattcctgactgataattcgtcctattct
ctcttggaggtgctatgtcctcgatgtgatattggccttttgggattgaagaggaagcag
agaaagttaaaggagcccttgccaagtggcaagaagagaagccccagagtagagagtctg
agtgacctggagagagctctgactgaaagcagagagactgcttcagctatggcaacgctt
ggggaagcccgcttacgagaaatggaagccttgcagtctctcagacaagccaatgagggg
aaattgctgtcgccagtccaggatgtggagatgaaggtctgcctgtgtcagaaggcccca
gctgcccccatgatccagtgtgaactctgcagggatgctttccacaccggctgtgtggcg
gtacccagtattacgcagggcccccggatctggctgtgtccccattgtcggaggtcagag
aaacctccattagagaaaattctgcccctgctggcctccctccagcgtatccgagttcgc
cttcccgagggagatgcgctgcggtatatgattgaaagaaccgtgaactggcagcacaga
gcccgacagctgctctcgtcaggtaacctccagtccatgcaggagcgagcgggctcagga
ctgttatgtggaagatggcaggccgcagcaggacaggcgccagagacaagcaagctatct
cagcctcctggctccacgtccttttccttgcccgatgactgggacaacagaacctcatat
ttacactctcccttctctactggacggagctgtatccccctccatggtctaagcccagaa
gtgagtgagctcttgatggaggcccagctgctccaggtgtcccttcccgaaattcaggag
ctctaccagacgctactcgcaaagccgagccctgcgcagcaagctgaccgcggctctcca
gtgagacccagcagcgagaagagtgacggctgccgtgcgaagcgagacggggtcggtggc
ctcgagagcaaactgaagagacgcctggaaagagaaggcctctccgccgagcggtgggag
cgagtcgccaaaacgcggacgcctaaaaagaagaggatcaaactgagccgccgcaaggac
acgaacagtttcaagttagagagggcgcgtggctctgagctggtcccttctgcggacact
cagtccctgccctcagacacgtcctgctcggagcaggaggcctctgaggacgaggacgcc
gtctgcccggccgcgagctgcctgcagccagaaggagacgaggtggactgggtccagtgt
gatggcagctgcaatcggtggttccatcaggtctgtgttggtgtctctcccgagacggcc
gaggaggaggactacgtgtgcgcgtgctgtgcggcgacggacgcgccgggccggagataa

DBGET integrated database retrieval system