Physeter macrocephalus (sperm whale): 102983594
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Entry
102983594 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-4B-like
KO
K10609
cullin 4
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03420
Nucleotide excision repair
pcad04120
Ubiquitin mediated proteolysis
pcad05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102983594
09124 Replication and repair
03420 Nucleotide excision repair
102983594
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102983594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102983594
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102983594
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102983594
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
102983594
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
102983594
TCR (transcription coupled repair) factors
Cul4-CSA complex
102983594
Exosome [BR:
pcad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102983594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF4298
Motif
Other DBs
NCBI-GeneID:
102983594
NCBI-ProteinID:
XP_054939947
UniProt:
A0A9W2WL81
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All DBs
Position
4:144693273..144696129
Genome browser
AA seq
871 aa
AA seq
DB search
MFPTGFSSPSLSAAAAQEVRSATDGNTSTTPPGVIPAPPLTSAKTRKLNSSSSSSSSNSS
NDREDFDSTSPSSSTPLQPRDSASPSTSSFSCLGVSAAAPRHVGIQKKLRLEDTLEFVEF
DAKMAEESSSSSSSSRTAATSQQQQLKNESILISSVASVHHANGLAKSSTTVSSFANSKP
GSAKKLVIKNFKDKPKLPESYTDETWQKLKKAVEAIQNSASIKNNLEELYQAVENLCSYK
ISADWYQQLRQIGNDHIKAQIHQFREDSLDRVLFLKKIDRCWQNHCRQVIMIRSIFLFLD
RTYVLQNSMLPSILERNSEAIDRRLLRSLLSMLSDLQIYQDSFEQRFLEETNQLYTAEGQ
KLMQEREVPEYLHHVNKCLEEEADRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKDLN
KLLDENRIQDLSHLYQLFSRVRGGIQVPVQQWIXYIKAFGSTIVINPEKDKTMVQELLAF
KDKVDHVTDICFLKNEKLINAMKEAFETFINKRPKKPAELIAKYSDSKRLSGNKEATDEE
LEKMLNKIMIIFRFIYGKNVFEAFCKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFT
SELEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVTILTMGYWPTYVPMEVHLPPEMV
KLQEIFKTFNLGKHSGRKFQWQSTLGHCVLKAEFKEGKKELQFSLFQSLVLLMFNEGEEL
SLEEIKQATGIEAGELRRTLQSLACGKARVLMKNPKGKAIEDGDKFICNDDFKHKLFRIK
INQIQMKEMVEEQAIITEXVFQDRQYQIDAAIVQIMKIRKTLSHNLLVSEVYNQFKFPVK
PADLKKRIESLIDWDYMERDKENPNQYKYIA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttttcttcccccagtctctcagctgctgctgctcaggaggtcaga
tctgccactgatggtaataccagcaccactccgcccggtgtaataccagcaccaccactc
acctctgccaagacgagaaagttaaacagcagcagcagcagtagcagcagtaacagtagt
aacgacagagaagactttgactccacctctccgtcctcttccactcctttacaacccagg
gattcggcatccccttcaacctcctccttctcctgcctgggggtttcagcggctgctccc
aggcacgtagggatacagaagaagctgcgtttggaagacaccctggagtttgtagagttt
gatgcgaagatggctgaggaatcctcctcctcctcctcatcttcacgaactgctgcaaca
tctcagcagcagcaacttaaaaatgagagtatattaatctcttctgtggcttcggtgcat
cacgcaaacggcctagccaaatcttctaccaccgtctctagctttgctaacagcaagcct
ggctctgctaagaagttagtgatcaagaactttaaagataagcctaaattaccagaaagc
tacacagatgaaacatggcagaaactgaaaaaagcagtggaagctatccagaatagtgct
tcaattaagaacaatttagaagaactctatcaggccgtggaaaatctctgttcttacaag
atttcggcagactggtaccaacagctgagacagattggtaacgatcacatcaaagcacaa
attcatcagttcagagaggattcattggatagagttctttttctaaagaagatcgataga
tgttggcaaaaccattgcagacaagtgatcatgatccggagcatttttttgtttctggat
aggacttacgttcttcagaattcaatgctaccctccattttggaaaggaatagtgaagca
attgatagacgtttactccgaagccttttaagcatgctctctgatttgcaaatttatcag
gattcttttgaacaacgatttttggaagaaactaaccaactctacacagctgaaggccaa
aaattaatgcaggaaagagaggttcctgaatatcttcatcatgttaacaaatgtctagaa
gaagaagcagatagacttattacttacttagatcagaccacccaaaagtcattaatagct
actgtggaaaaacaacttctaggtgaacacttaacagcgattcttcagaaagatttaaat
aaactccttgatgaaaaccgaattcaagatttatctcacctgtatcagctcttcagtaga
gttcgagggggcattcaggttcccgtgcagcaatggatttaatacattaaggcatttggt
agcactattgtaattaatcctgaaaaggataaaaccatggttcaagaattgttggctttt
aaagataaggttgaccatgtaactgatatctgtttcctgaagaatgaaaaacttatcaat
gccatgaaagaagcatttgaaacattcattaacaaaagaccaaaaaaacctgctgaactt
atagctaagtattcagattcgaagcgtctctcaggcaacaaagaagctacagatgaagaa
cttgagaaaatgttgaataagattatgattatatttagattcatctatggcaagaatgtt
tttgaggccttctgtaagaaagatttagccaagcgcctgttagttgggaagagtgcatct
gtggatgctgaaaaatcaatgctgtccaaacttaaacatgaatgtggagctgctttcacc
agcgaacttgaaggaatgtttaaagacatggaactttctaaagacatcatgattcaattc
aaacagtatatgcagaaccagaatgtacctgggaatattgaattaactgtgactatcctg
acgatgggttattggccaacatatgtgcctatggaagttcatttaccaccagagatggta
aaacttcaggagattttcaagacctttaacctaggcaaacatagtggcaggaaatttcag
tggcagtcaaccctaggacactgtgtgctaaaggcagaatttaaagagggtaaaaaggaa
ctccagttctctctttttcaatcactggtgctgctaatgtttaatgagggagaagagtta
agtttagaagagatcaagcaggctacaggaatagaggctggagagttaaggagaacactg
cagtcattggcctgtggcaaagctagagttctgatgaaaaatccaaagggtaaagctata
gaagatggtgacaagttcatttgtaatgatgatttcaagcacaaacttttcaggataaag
atcaatcaaattcagatgaaagaaatggttgaggaacaagcaatcattacagaannagta
tttcaagacagacagtatcaaattgatgctgcaattgttcaaattatgaagataagaaag
acacttagccacaatctccttgtttcagaagtgtacaaccagttcaaatttccagtaaag
cctgctgatcttaagaagagaatagaatccttaattgactgggactacatggaaagagat
aaagaaaatccaaaccagtacaaatatattgcataa
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