KEGG   Physeter macrocephalus (sperm whale): 102983611
Entry
102983611         CDS       T06011                                 
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
pcad  Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcad03009]
    102983611 (RRP9)
Ribosome biogenesis [BR:pcad03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    102983611 (RRP9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Vps41 WD40_like WDR54 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 102983611
NCBI-ProteinID: XP_007106009
Ensembl: ENSPCTG00005015474
UniProt: A0A2Y9EP05
LinkDB
Position
Unknown
AA seq 475 aa
MSATGAARKRGKPASGAGAGAGASKLRRKGDSSGDKGKSKGGGKMNEEISSDSESESLVP
RRNEEEEEEELEETAQEKKLRLAKLYLEQLKQQEEEKAEAREFEEDQVAGRLKEDVLEQR
GRLQKSVAKEIQAPDPADIRILRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGRK
LHVIPRAKKGAEGQPSGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGH
RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA
GGRDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLAL
QREAHGLRGELGLEQPFWVSSVAALLNTDLVATGSHSSSVRLWQCGEGFRQLDLLCDIPL
VGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLHRAPRPPAAGS
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtcggcgacaggggcggctcgaaagaggggaaagccggcctcgggggccggggctggt
gcgggggccagcaagctgcggcgaaagggcgactcttctggggacaagggcaagtccaag
ggtggcggcaagatgaatgaggagatctccagtgactcggagagcgagagcctagttccc
aggaggaatgaggaggaggaggaggaggagctggaggagaccgcacaggagaagaagctg
cgcttggccaagctctaccttgagcagctcaagcagcaagaggaggagaaggccgaggcc
cgcgaatttgaggaggaccaggtggcggggaggctgaaggaggacgtgcttgagcagaga
ggcaggctgcagaagtcggtggcaaaggagatccaggccccagaccctgctgacattcga
atcttacggggccaccagctgtccatcacatgtttggttatcacccctgacgacctggcc
atcttttctgccgccaaagactgcaccattattaagtggagtgtggaaagtggacggaag
cttcatgtgatccctcgagccaagaagggtgctgaggggcagccctccggccatagtagc
cacgtcctctgcatggccatctcctccgatggcaagtacctggcctcgggtgaccgcagc
aagctcattctcatttgggaggcccagagctgccagcacctgtacaccttcacgggacac
cgggacgccgtgtcggggctggcattccgcagaggcacccaccagctctacagcacgtcc
cacgaccgctctgtaaaggtgtggaatgtggcagagaactcctacgtggagacgctcttc
gggcaccaggatgctgtggctgcactggatgctctgagcagggagtgctgcgtgaccgct
gggggccgggatgggaccgtgcgtgtgtggaagatccccgaggagtcccagcttgtcttc
tacggccaccagggctccatcgacagcatccagctcatcaacgaggagcacatggtgtcg
ggtgcagatgatggttctgtagccttgtggggcctctctaagaagcggccacttgccctg
cagcgtgaggcccatgggctgcggggggagctgggcttggagcagcccttctgggtgtca
tcggtggcagccctgctcaacacagacctcgtggccacaggctctcacagcagctctgtg
cggctctggcaatgcggggagggcttccggcagcttgaccttctctgcgacatccccctg
gtgggcttcatcaatagcctcaagttctccagtgctggggacttcctggtggccggggta
gggcaggagcacaggcttggccggtggtggcggatcaaagaggcccggaactccgtctgc
atcatccctctccacagggcccccaggccccctgctgctggctcctga

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