Physeter catodon (sperm whale): 102983621
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Entry
102983621 CDS
T06011
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X2
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04010
MAPK signaling pathway
pcad04064
NF-kappa B signaling pathway
pcad04380
Osteoclast differentiation
pcad04625
C-type lectin receptor signaling pathway
pcad05134
Legionellosis
pcad05166
Human T-cell leukemia virus 1 infection
pcad05169
Epstein-Barr virus infection
pcad05200
Pathways in cancer
pcad05203
Viral carcinogenesis
pcad05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102983621 (NFKB2)
04064 NF-kappa B signaling pathway
102983621 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
102983621 (NFKB2)
09158 Development and regeneration
04380 Osteoclast differentiation
102983621 (NFKB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102983621 (NFKB2)
05203 Viral carcinogenesis
102983621 (NFKB2)
09162 Cancer: specific types
05224 Breast cancer
102983621 (NFKB2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102983621 (NFKB2)
05169 Epstein-Barr virus infection
102983621 (NFKB2)
09171 Infectious disease: bacterial
05134 Legionellosis
102983621 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102983621 (NFKB2)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
102983621 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
102983621
NCBI-ProteinID:
XP_007126942
Ensembl:
ENSPCTG00005019685
UniProt:
A0A2Y9FMN6
LinkDB
All DBs
Position
20:complement(58130677..58138904)
Genome browser
AA seq
900 aa
AA seq
DB search
MDSCYDPGLDGIIEYDDFKFNPSIVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGP
SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVC
AVSVGPKDMTAQFNNLGVLHVTKKNMMEIMIQKLQRQRLRSRPQGLTEAERRELEQEAKE
LKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
GGPAGGYGGAGGGGGSLGFFSSSLAYSPYQSGAAPMGCYPGGGGGAQMASEAPSVDAGEE
AAEPSAPSGTLQREQQAPELLHRAREYNARLFGLAQRSARALLDYGVTADARALLAGQRH
LLTAQDENGDTPLHLAIIHGQTSVIEQIAHVIYHAPHLGVVNLTNHLHQTPLHLAVITGQ
TSVVSFLLQVGADPALLDRHGDSAVHLALRARASAPDLLRTLLRSGVPSMPQLLHVPDFE
GLYPVHLAVRARSPECLDLLVDNGAEVEAAERQGGRTALHLATEMEELGLVTHLVTKLRA
NVNARTFAGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPLCPLPSPPTSGSDSDSEG
SERDTRGSFRGHTPLDLTRSSKVKTLLLNAAQDTMAPPLTPPSPAGPEMPLEDTVLQNLE
HLLDGPGAQGSWAELAERLGLRSLVDTYRKTASPSGSLLRSYKLAGGDLAGLLDALSDMG
LEEGVRLLRGPETREKLPSTEVKEDSAYGSQSVEQEAEKLGPPPEPPGGLCHGHPQPQVH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggacagttgctacgacccaggtctggatggcatcattgaatatgatgatttcaaattc
aacccgtccattgtggagcccaaggagccagccccagagacagctgatggcccctacctg
gtgatcgtggaacagcctaagcagcgaggcttccgatttcgatatggctgtgaaggccct
tcccacgggggactgccaggtgcctccagcgagaagggtcggaagacttatcccactgtc
aagatctgtaactacgagggaccagccaagatcgaggtggacctggtaacacacagtgac
ccgcctcgtgctcacgcccacagtttggtgggcaagcaatgctccgagctgggggtctgc
gcagtgtctgtggggcccaaggacatgactgcccaatttaacaacctgggtgtcctgcat
gtgaccaagaagaacatgatggagattatgatacaaaaacttcagagacagcggcttcgc
tccaggccccagggccttacggaggctgagcgtcgggagctggagcaggaggccaaggaa
ctaaagaaggtgatggatctgagcattgtgcggctgcgcttttctgccttccttcgagcc
agtgatggctccttctctctgcccctgaagccagttatctctcagcccatccatgacagc
aagtctcctggagcctcaaacctgaagatttctcgaatggacaagacagctggctctgtg
cggggtggagatgaggtttatctgctttgtgacaaggtgcagaaagatgacattgaggtt
cggttctacgaggatgatgagaatggatggcaggccttcggggacttctctcccacagat
gttcacaaacagtatgccattgtgttccggacacctccctatcacaagatgaagattgag
cgtcctgtaaccgtgttcctgcaactgaaacgcaagcgtgggggggatgtctctgactcc
aaacagttcacctattatcctctggtggaagacaaggaggaggtgcagcggaagcggagg
aaagccttgcccaccttctcccagccctttgggggtggctcccacatgggtggaggctct
gggggcccggctgggggttatggaggagctggaggaggaggtggcagcctcggctttttc
tcctcctccttggcctacagcccctaccagtccggtgcggccccaatgggctgctacccg
ggaggcgggggcggggcgcagatggcctccgaggcgcctagcgtggatgctggggaggaa
gcagcagagccgagcgccccctccgggaccctccagcgcgaacagcaggccccagagctg
ctgcatcgagcccgggaatacaacgcgcgcctcttcggcctggcgcagcgcagcgcccga
gccttgctcgactacggcgtcacagcagacgcgcgcgcgctgctggcgggacagcgccac
ctgctgaccgcgcaggacgagaacggagacacgccgctgcatttggccatcatccacggg
cagaccagcgtcattgagcaaatagcccacgtcatctaccacgccccgcacctcggcgtt
gttaatctcaccaaccacctgcaccagacgcccctgcatctggcagtgatcaccgggcag
accagcgtggtgagcttcctgctgcaggtgggcgcagatccagcactgctggatcggcat
ggagactcagccgtgcacctggcactccgggcacgtgccagtgcccccgacctgctgcgc
accctgctgcggagtggggttcccagcatgccccagctgttgcacgtgccagacttcgaa
gggctgtacccagtacacctggcggtccgtgcccgaagccccgagtgcctggatctgctg
gtggacaacggggctgaagtggaggctgcagagcggcaggggggccgaacagccctgcat
ctagccacagaaatggaggagctggggttggtcacccatttggtcaccaagctccgggcc
aacgtgaatgcccgtacctttgcgggaaacacgcccctacacctggcagctggactggga
tccccgaccctcacccgtctccttctgaaggctggtgccgacatccatgcagagaacgag
gagcccctgtgcccactgccttcgccccccacctctggtagtgactcagattctgagggc
tctgagagggacacccgaggcagctttcggggccacacacctcttgacctcactcgcagc
agcaaggtgaagaccttgctgctaaatgctgctcaggacaccatggcgccccccctgacc
ccacctagccctgcaggaccagagatgccactcgaggatacagtcctacagaacctggag
catctgctagacgggccaggagcccagggcagctgggcagagctggcagaacggctgggt
ctgcgcagtctggtggacacgtatcgaaagacggcctcacccagcggcagtctcctacgc
agttacaagctggctggtggggacttggcgggcctgctggatgccctgtctgacatgggc
ctggaggagggagtgaggctgctgaggggtcctgagacccgagaaaagctgcctagcaca
gaggtaaaggaggacagtgcatatgggagccagtcggtggaacaggaagcagagaagctg
ggccctcctcctgagccaccaggagggctctgccacggacatccccagcctcaggtgcac
tga
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