Physeter macrocephalus (sperm whale): 102983830
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Entry
102983830 CDS
T06011
Symbol
LTA
Name
(RefSeq) lymphotoxin-alpha
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04060
Cytokine-cytokine receptor interaction
pcad04061
Viral protein interaction with cytokine and cytokine receptor
pcad04064
NF-kappa B signaling pathway
pcad04668
TNF signaling pathway
pcad04940
Type I diabetes mellitus
pcad05166
Human T-cell leukemia virus 1 infection
pcad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102983830 (LTA)
04668 TNF signaling pathway
102983830 (LTA)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
102983830 (LTA)
04061 Viral protein interaction with cytokine and cytokine receptor
102983830 (LTA)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102983830 (LTA)
05168 Herpes simplex virus 1 infection
102983830 (LTA)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
102983830 (LTA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pcad04052
]
102983830 (LTA)
Cytokines and neuropeptides [BR:
pcad04052
]
Cytokines
Tumor necrosis fators
102983830 (LTA)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
102983830
NCBI-ProteinID:
XP_007110222
Ensembl:
ENSPCTG00005013458
UniProt:
A0A2Y9EWR4
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Position
18:complement(85185297..85187320)
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AA seq
205 aa
AA seq
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MTPPGRLYLLRVCSTPLLLLLLGLLLALPPEAQGLSGVGLPPSTAQPAHQHPQNHFTRGT
FKPAAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGEGC
FPKATPTPLYLAHEVQLFSSQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLARGDQ
LSTHTDGISHLLLSPSSVFFGAFAL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacctggacgtctctacctcctgagggtgtgcagcacccccctactcctcctc
cttctgggactgctgctggccctgccgcccgaggcccaggggctctctggtgttggcctc
ccaccctcaactgcacagcctgcccatcagcacccccagaatcacttcacccgaggcacc
ttcaaacctgccgctcaccttgttggagaccccagcacccaggactcactgcgctggaga
gcaaacacggatcgtgccttcctccgccacggcttttctctgagcaataattccctcctg
gtccccactagtggcctctacttcgtctactcccaggtggtcttctctggggaaggctgc
ttccccaaggccacccccacccctctctacctggcccacgaggtccagctcttctcctct
cagtacccattccacgtgcctctcctcagcgctcagaagtccgtgtgcccagggccacag
ggaccttgggtgcgctcggtgtaccagggggctgtgttcctgctcgcccggggagaccag
ctatccactcacacagatggcatctcccacctgctcctcagccccagtagtgtcttcttc
ggagccttcgctctatag
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