Physeter catodon (sperm whale): 102983999
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Entry
102983999 CDS
T06011
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X3
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04136
Autophagy - other
pcad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102983999 (ATG4B)
04136 Autophagy - other
102983999 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcad01002
]
102983999 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102983999 (ATG4B)
03029 Mitochondrial biogenesis [BR:
pcad03029
]
102983999 (ATG4B)
Peptidases and inhibitors [BR:
pcad01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
102983999 (ATG4B)
Membrane trafficking [BR:
pcad04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
102983999 (ATG4B)
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102983999 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
102983999
NCBI-ProteinID:
XP_023980486
Ensembl:
ENSPCTG00005014725
UniProt:
A0A2Y9SP85
LinkDB
All DBs
Position
2:138731311..138751451
Genome browser
AA seq
393 aa
AA seq
DB search
MDAATLTYDTLRFAEFEDFPETSEPLWILGRKYSIFTEKDEILADVASRLWFTYRKNFPA
IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTRRTRQPDSYFSVLHAFLDRKD
SCYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSALAVHVAMDNTVVMEDIR
RLCRSSLPCAGAAAFPADSQRHCNGFPAGAEVSSRPSPWRPLVLLIPLRLGLTDINAAYA
ETLKHCFMMPQSLGVIGGKPNSARYFIGYVGEELIYLDPHTTQPALQAAEHCPIPDESFH
CQHPPSRMSIAELDPSIAVGFFCGTEDDFDDWCQQVKKLSLLGGALPMFELVERQPSHLA
CPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagctactctgacctacgacactctccgatttgctgagtttgaagatttccct
gaaacctcggagcctctttggatcctgggtagaaagtacagcatcttcacagaaaaggac
gagatcttggccgatgtggcgtcgagactttggtttacatacaggaagaacttcccagcc
attgggggcaccggccccacctcggacacgggctggggctgcatgctgcggtgtggacag
atgatctttgcccaagccctggtgtgccggcacctgggccgagactggaggtggacgcgg
cggacgaggcagccggacagctacttcagcgtcctgcacgcattcctggataggaaggac
agctgttactccatccaccagatagcacaaatgggagtcggcgagggcaagtccatcggc
cagtggtacgggcccaacaccgtcgcccaggtcctcaagaagctcgccgtcttcgacacg
tggagtgccctggccgttcacgtagcgatggacaacacggtggtgatggaggacatcaga
aggttgtgcaggagcagccttccttgtgctggggccgcagcgtttcctgcagattcccag
cgacactgtaacgggttcccggctggggccgaggtcagcagcaggccgtcgccatggaga
ccgctggtgctgctcatcccgctgcgcctggggctcacggacatcaacgcggcctacgcg
gagacgctgaagcactgcttcatgatgccccagtccctgggcgtgattggagggaagccc
aacagtgcccgctacttcatcggctacgtgggtgaggaactcatctacctggaccctcac
accacgcagccagccctgcaggccgctgagcactgcccgatcccggacgagagcttccac
tgccagcacccgcccagcaggatgagcatcgcagagctcgacccgtccatcgccgtgggg
tttttctgtgggaccgaggacgactttgacgactggtgccagcaagtgaaaaagctgtcc
ctccttggaggcgccctgccaatgtttgagctggtggagcggcagccctcccacctggcc
tgtcctgacgtcctgaacttgtccttagattcttctgacgtagagcgactggaaagattc
tttgactcagaagatgaagactttgaaatcttgtccctttga
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