Physeter macrocephalus (sperm whale): 102984066
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Entry
102984066 CDS
T06011
Symbol
YTHDC2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102984066 (YTHDC2)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102984066 (YTHDC2)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102984066 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
OB_NTP_bind
DEAD
Ank_2
AAA_19
nSTAND3
Ank
AAA_22
HA2_N
ATPase
PhoH
AAA_16
AAA_7
AAA_23
AAA_29
UvrD-helicase
ABC_tran
T2SSE
SRP54
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
102984066
NCBI-ProteinID:
XP_007122655
Ensembl:
ENSPCTG00005000672
UniProt:
A0A2Y9FGZ9
LinkDB
All DBs
Position
8:111281481..111350340
Genome browser
AA seq
1268 aa
AA seq
DB search
MSKTSGRLNNGIPQIPVKRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGK
TTQIPQFLLDDCFQNGIPCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRV
SPKTLLTFCTNGVLLRTLMGGDSSLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTL
KLILSSAALDVNLFMRYFGSCPVTYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQ
REERQQTTLTEWYSAQENTFKPESQRQRAVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLE
PWLIKEMDACLSDIWLHKDVDAFAQVFHLILTENVSVDYTHSETSATALMVAAGRGFSSQ
VEQLISMGANVHIKASNGWMALDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTNES
DLSAEDRELLKAYHHSFDDEKVDLDLIMHLLYNICHSCDSGAILIFLPGYDEIVGLRDRI
LFDDKRFAENTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVF
VIDSGKMKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLE
FQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVHMLKTIDAMDAW
EGLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPVQASQKRAA
MLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIVGMRTQLLG
QLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAGMYPHLVHVDRENVVLTGPKEKKVR
FHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLI
FCGPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASL
LLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPM
SSEELPLASSWRSNNSRKISADTEFSDESTTAERVLMKSPSPALHPPQKYKDRGILRPKR
STDDKSDQSSVKSTDSNSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLE
ISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGS
AGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLS
LGEKTTAD
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaaagagga
gaatctgaatttgattctttcaggcagtctctgccagtgtttgagaaacaagaagaaatt
gttaaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtctggaaag
actacacagattcctcagttccttttagatgattgctttcaaaatggtatcccctgccgt
atattttgtactcaaccaagacgattagcagctattgctgtggctgaaagagttgctgca
gagagaagagaaaggattggtcagacaattgggtatcagatccgtttagaaagcagggtt
tctccaaagacacttctgacattttgcaccaatggggtactgcttcgtactctgatggga
ggagatagttcattgtcaactgtgacacatgttattgtggatgaagtacatgaaagggat
cgatttagtgattttttacttacaaagttaagagatttgttgcagaagcacccaactttg
aaactaattctttctagtgctgccttagatgtaaatctttttatgagatattttgggagt
tgtccagtgacatacatacagggaagaccatttgaagtaaaagaaatgtttctggaagac
attttaagaactactggatacacaaacaaagaaatgttaaaatacaaaaaggaaaaacaa
cgagaagaaagacaacaaaccacacttacagaatggtactcagctcaagagaatactttc
aagcctgaatctcagagacagagagctgtcccaaatgtgactgaagaatatgatttattg
gatgatggtggtgatgccgtctttagtcagttgacagaaaaagatgtgaattgccttgag
ccatggttaataaaggaaatggatgcttgtctttctgacatatggctgcataaagatgtt
gatgcctttgctcaggtctttcaccttattttaactgaaaatgttagtgtggattacaca
catagtgaaaccagtgcaacagctttgatggttgctgcaggacgaggtttttcaagtcaa
gtagaacagttaattagtatgggagccaatgttcatattaaagcatcaaatggctggatg
gctttagattgggctaaacactttgggcagactgaaattgtggatcttctagaatcttac
agtgcttcattggaatttggaaatttagatgaaagttctttggttcaaacaaatgagagt
gatctcagtgcagaagacagagagctcctgaaagcttatcatcatagttttgatgatgaa
aaagtagacttggatttgatcatgcatcttctatacaatatctgccatagttgtgattct
ggtgcaatattgattttcctgcctggatatgatgaaattgttggtctgagggatcgcatc
ctgtttgatgacaagcggttcgctgagaatactcatagataccaagtctttatgcttcat
tcaaatatgcaaacatccgatcaaaagaaggtattaaaaaacccacctgcaggtgttcga
aaaataatcctttccaccaatattgctgaaaccagcatcacagtcaatgacgttgtcttt
gttatagattctggtaaaatgaaagagaaatccttcgatgcactgaattttgttacaatg
ttaaaaatggtgtggatttccaaagctagtgccatacagcgaaaaggcagggcagggcga
tgcagacctggaatttgtttccggctgttcagtagacttcgattccagaatatgttggaa
tttcagactccagaacttttgagaatgccattacaggaactttgtttacataccaagctc
ttagccccagttaattgtcctattgctgatttccttatgaaagctcctgaacctccacca
gctttaattgtaagaaatgctgtgcacatgcttaagacaatagatgcaatggatgcatgg
gaaggtctcactgaacttggatatcatttggctgacttgccagtagaaccacatcttggt
aaaatggtcctgtgtgctgtggtgttaaagtgtctggaccccatccttacaattgcctgc
acactagcctatcgagatccttttgtcctgccagtgcaggcctctcaaaaacgtgcagct
atgctttgtaggaaacgtttcactgcagggactttcagtgaccacatggcacttctcaga
gcattccaggcatggcagaaagctcgaagtgatgggtgggagcgagccttttgtgaaaag
aactttctttcacaagctactatggaaataatcgtaggcatgagaactcagttgcttggt
caacttagagcatcaggttttgtgagagcacgaggtggtggtgacattcgagatgttaac
acaaattctgagaactgggctgttgttaaagctgcattggttgcaggcatgtatcctcat
ttagtccatgtggacagagagaatgtagtattgacagggccaaaggagaaaaaagtacgg
tttcatcccacttcagttctcagtcagcctcaatataaaaagattcctccagctaatggt
caagctgcagcaattcaggcactgcccacagattggcttatttatgatgaaatgaccaga
gctcatagaatagctaatattagatgttgttcagcagtgacacctgtcactgtattgata
ttttgtggaccagctaggttggcaagtaatgctcttcaggaaccttcgtcttttcgagca
gatggtattcctaatgacagtagtgatagtgaaatggaagacagaactactgctaatttg
gcagctttaaaacttgatgagtggctcaatttcaaactagagccagaggcagccagttta
ttgctgcagcttagacagaagtggcatagcttatttttacgccgaatgagagctccatcc
aaaccttggtcccaagttgatgaagctaccataagagcaattatagctgttttaagcact
gaagaacagtctgcaggtttacaacaaccatctgggattggccaaaggccaaggcctatg
tcttcagaagaacttcctttggcatcatcttggaggtcaaataatagtaggaaaatttca
gcagatactgaattttctgatgagtctactactgcagaaagagtactgatgaagtctcca
tctccagcactgcacccacctcagaaatacaaagatagaggaattttacgtcctaaacga
agcactgatgacaagtcagatcaatcttctgtgaaatctacagacagcaatagttatcca
agtccttgtgctagtccttctcctccatcctcaggaaagggctcaaaatctccttcacca
agaccaaacatgcctattcgatacttcataatgaagagtagcaatctgagaaaccttgaa
atttctcaacagaagggtatctggtctacaacccctagtaatgagcggaagctaaaccga
gccttttgggaaagcagcatggtttacttggtattttctgttcaaggatctggacatttc
cagggattttctagaatgtcttctgagataggaagggagaagagtcaggactggggttca
gctggactaggaggagtgtttaaggtggagtggatacgaaaagaaagtcttccctttcag
tttgcacaccatttactcaatccttggaatgacaacaagaaagtccagataagcagagat
gggcaggaactagaacctcaggttggtgaacagttgctccagttatgggaacgcctttca
ttgggagaaaaaaccacagctgattga
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integrated database retrieval system
