Physeter macrocephalus (sperm whale): 102984231
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Entry
102984231 CDS
T06011
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X2
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102984231 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102984231 (FIP1L1)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102984231 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
102984231
NCBI-ProteinID:
XP_007119485
Ensembl:
ENSPCTG00005005849
UniProt:
A0A2Y9FE05
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Position
7:complement(51749435..51815336)
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AA seq
603 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASKKANSSVGKWQDQCG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESG
HSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRER
DRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRER
RHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAT
PAE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcct
ccatcaggaattgaagatgaaactcctgaaaatggcgtacctaaaccgaaagtgacagag
actgaagacgatagtgatagcgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaagacaggaggaagagtttatggaactacaggaacgaaagtcaaaggagtagat
cttgatgcacctggaagcattaatggagtgccacttttggaggtagatttggattctttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggactggaa
gttataccagttacctctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaaacagcgcttccatctacaaaagctgagtttacttctcct
ccttctttgtttaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccaaaaaagccaattcaagcgttgggaagtggcaggatcaatgtggg
agggccgaatcacctgatctaaggagattacctggggcaattgatgttattggtcagact
ataactatcagccgagtagaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccaccgccatttttc
cctccaggagctcctcccactcaccttccaccgcctccatttcttccacctcctccaact
gtcagcactgctccacctctgattccaccaccaggtattccaataactgtaccacctcca
ggttttcctcctccaccaggcgctccacctccgtctcttataccaacaatagaaagtgga
cattcctctggttatgatagtcgttctgcacgtgcttttccatatggcaatgttgccttt
ccccaccttcctggttctgctccttcatggcctagtcttgtggacaccagcaagcaatgg
gactattactcaagaagagagaaagaccgagatagagatagagacagagaccgagaacga
gatcgtgatcgagacagagaaagagaacgcaccagagagagagagagggagcgtgatcat
agtcccacaccgagtgttttcaacagtgatgaagaacgatacagatacagggaatatgca
gaaagaggctatgagcgccacagagcaagtcgggagaaagaagaacgacacagagaaaga
cgacacagagagaaagaggaaaccagacacaagtcctctcgaagtaatagtaggcgtcgc
catgaaagtgaagaaggagacagtcataggagacacaagcacaaaaaatctaaaagaagc
aaagaaggaaaagaagctggcagcgagcctgcccctgaacaggagagcaccgaagctaca
cctgcagaatag
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