Physeter macrocephalus (sperm whale): 102984571
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Entry
102984571 CDS
T06011
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102984571 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102984571 (POLR1B)
Enzymes [BR:
pcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102984571 (POLR1B)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
102984571 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
102984571
NCBI-ProteinID:
XP_054944852
Ensembl:
ENSPCTG00005007868
UniProt:
A0A9W2X0F2
LinkDB
All DBs
Position
12:complement(13032579..13067530)
Genome browser
AA seq
1153 aa
AA seq
DB search
MLSGACGAVAGIRCAGGLMDPGGRWRHLPSGPSLKHLTDPSYGVPREQQKPALQELTRAH
VESFNYAVREGLSHAVQAIPPFEFAFKDERISLTIVDAVISPPTVPKGSICKELNVYPAE
CRGRRSTYRGKLTADISWAVNGISKGIIKQFLGYVPIMVKSKLCNLYNLPPKALIQHHEE
AEEMGGYFIINGIEKVIRMLIMPRRNFPIAMVRPKWKSRGPGYTQYGVSMHCVREEHSAV
NMNLHYLENGTVMLNFIYRKELFFFPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSV
SQMLRIVMEEGCSTQKQVLSYLGERFRVKLSLPDWYSNEHAAEFLFNQCICIHLKSNTEK
FYVLCLMTRKLFALAKGECMEENPDSLVNQEVLTPGQLFLMFLKEKLEAWLASIKIAIDK
KSQKTNVSLNTENLMKIFTLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNF
IRYLSHFRCVHRGADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVT
QFVYTASIPALLCSLGVTPVDGAPHRPYGECYPVLLDGVMVGWVEKELAPGIADSLRHFK
VLREKRIPPWMEVVLIPMTGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFM
NVAIFEDEVLAGVTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLT
FQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKA
SWERGFAHGSVYKSECIDLSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYG
DPYYSYLNLNTGESFVMYYKSKENCIVDNIKVCSNDTGNGKFKCVCITMRVPRNPTIGDK
FASRHGQKGILSRLWPVEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHG
LCHDATPFIFSEENSALEYFGEMLKAAGYNYYGTERLYSGISGLELDADIFIGVVYYQRL
RHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCS
DRSVAHVCVKCGSLLSPLLEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAE
LAAMNIKVKLDIV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctttccggcgcgtgtggagccgtggctggcatccggtgtgcaggcggactcatggat
cccggcggccggtggcggcacctacccagcgggcccagcctaaagcacttgaccgacccc
tcttacggggtcccgcgggagcagcaaaagccagcgttgcaggagctgacgcgggcgcat
gtcgagtccttcaactacgctgtgcgcgaggggctcagccacgcggtgcaggccatccct
ccctttgaatttgctttcaaagatgagcggatctctcttactattgtggatgctgtcatc
agtccacccacagttccaaaagggagcatctgtaaagagctcaatgtttatccagcagaa
tgccggggccgaaggagcacctaccggggaaagctgacagctgatatcagctgggcagtg
aatggaatctcaaaaggaatcattaaacagtttcttggctatgttcccatcatggtgaaa
tccaagctttgcaacttatacaaccttcctccaaaagccctcatccagcaccacgaggaa
gcagaggaaatgggaggctattttataatcaatggcatcgaaaaagtcatccgaatgttg
attatgcctcgcagaaatttccccatcgcaatggtaagaccaaaatggaaaagcagaggg
cctggctatactcagtatggagtttcaatgcactgtgtgagggaagaacattctgcggtc
aatatgaaccttcactacttggaaaatggcacggttatgttgaactttatttaccggaaa
gaactgtttttttttcctttgggatttgcacttaaggcacttgtcagcttttccgattat
cagatttttcaggagctcatcaaaggaaaggaagatgactctttctttaggaactctgtt
tctcagatgttaaggattgtaatggaagagggatgttccacacaaaaacaggtccttagc
tatctgggtgaacgcttcagagtaaaactcagtcttcctgactggtactcaaatgaacac
gctgcagagtttctcttcaaccagtgcatctgtatccacttgaaatccaacactgaaaag
ttttatgtgctttgtctcatgacccggaagctctttgctttagccaaaggagagtgcatg
gaggagaatcctgacagtttagtgaatcaagaggtcctgacccctgggcagctcttcctc
atgtttctgaaggaaaaactggaagcatggttagcatctattaaaatagctatagacaag
aagtctcagaagaccaatgtgtccttaaacacggaaaatttgatgaagatttttactctg
ggaacagacctgacaaaaccattcgaatatcttcttgctactgggaatctacgttctaaa
acaggtcttggcttcctgcaagattctggactgtgtgttgtggctgacaagctgaacttc
atacgctatctctcccatttccgctgtgtgcacagaggggcagactttgccaagatgcgg
accaccacagtacgcaggctgctgccggagtcctggggcttcctttgccccgtgcacacc
cccgacggggagccctgtggtctgatgaaccacttaaccgccatatgtgaggtcgtcaca
cagtttgtgtatacagcatctattccagctttgctctgcagcttgggtgtcactccagtt
gatggagctccacatcggccgtacggcgagtgctaccctgtcctgctggacggtgtcatg
gttggctgggtggaaaaggagcttgcacctggcattgccgattctctccgacattttaag
gttttgagagaaaaaagaattcctccctggatggaggtggtcctgatccccatgacagga
aaaccaagtctgtacccgggattgtacctctttaccactccttgtagactggtgcggcct
gtgcagaacttggaattgggcaaagaagaactaattggaactatggaacagatcttcatg
aacgttgctatctttgaggatgaggttttggctggcgttaccacccaccaggagctcttc
cctcacagcctgctgagtgtgatcgccaacttcatccctttctctgatcacaaccagagt
ccgagaaacatgtaccagtgccagatgggtaagcagactatgggctttccactcctcact
tttcaagaccggtcagataataaactgtatcgtcttcagactccacaaagccctttagtg
agaccatacatgtatgattattatgacatggataactatccaattgggacaaatgccatt
gttgctgttatttcttacactggctatgatatggaagatgccatgattgtgaataaggcc
tcgtgggaacgaggctttgcccatggaagtgtctacaagtccgagtgtatagatctgtct
gaaaaaatcaaacaaggagatgatagtctggtgtttggagtcaaacctggtgacccacgg
attctgcagaagttggatgatgacggattgccatttattggagcacaactgcagtatgga
gatccatattacagctacctaaacctcaacaccggggaaagctttgtgatgtactataag
agtaaagaaaattgtatcgtggataacatcaaagtgtgcagtaatgacactggaaatggc
aaattcaagtgtgtttgcatcacaatgagagtccctcggaacccaactatcggggataaa
tttgccagtcgtcatgggcagaagggcatcttgagcagactgtggccagttgaggacatg
ccattcactgagagcgggatggttccggacattctgttcaatcctcacggttttccatcc
cgtatgaccatcggtatgctgattgagagtatggcaggcaagtctgcagctttacatggt
ctctgccatgatgctacacccttcatcttctcagaggagaactcggccctggaatacttt
ggtgagatgttgaaggctgctggctacaactactacggcaccgagaggttgtatagtggc
atcagtgggctagagctggatgcagacatcttcataggtgtggtttattaccaacgctta
cgtcacatggtctcagacaaattccaagttaggacaacaggagccagagacaaagtcact
aaccagcctattgggggaagaaacgtccagggtggaatccgttttggggagatggagcgg
gatgctcttttagctcatggtacatcttttctccttcacgaccggctcttcaactgctcg
gatcggtctgtagcccacgtgtgtgtgaagtgtggtagtttgctctccccgctgttggag
aagcctcccccatcgtggtccgccatgcgcaacaggaagtacaactgtactctgtgtaat
cgcagtgacaccatcgacactgtttctgtgccttacgtctttcgctattttgtagctgaa
ctggcagctatgaacatcaaagtgaaactggatatcgtttaa
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integrated database retrieval system
