Physeter macrocephalus (sperm whale): 102984616
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Entry
102984616 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102984616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102984616
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102984616
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
102984616
NCBI-ProteinID:
XP_054941001
UniProt:
A0A9W2WP96
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Position
5:72674638..72675636
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AA seq
251 aa
AA seq
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MGACTGNVSLPLLFRSPLVPELASMSVVPPNHSHTGWPHGVNQFGNKYIQQTKPFTLERT
INLYPLINYTFGTREPLYEKDSSVAARFQSMRVEFDKIGMRRTVEGVLIVHEHRLPHVLL
LQLGTTFFKLPGDDLNPGEDEVEGLKRLMTEILGHQDGVLQDWVTDDCTGNWWRPNFEPP
XYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLP
QLLSRFNFIYN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcctgcacagggaacgtctccctgcctctccttttccgctcaccgctagtgccc
gagcttgccagcatgtccgtggtgccgcccaatcactcgcataccggctggccccacggg
gtcaaccagttcggcaacaagtacatccagcagaccaagcccttcaccctggagcgcacc
atcaacctgtaccctcttatcaattacacttttggtacaagagagcccctctatgagaag
gacagctccgttgcagccagatttcagagcatgagggtggaatttgataaaattggcatg
aggaggactgtagaaggggttttgattgtccatgagcaccggctaccccatgtgttactg
ctacagctgggaacaactttctttaaactacctggtgatgaccttaacccaggagaagat
gaagttgaaggactaaaacgcttaatgacagagatattgggtcatcaagatggagtcctg
caagactgggttactgatgactgcactggtaactggtggagaccaaattttgaacctcct
tagtatccatatattcctgcacatattacaaaacctaaggagcataagaagttgtttttg
gttcagcttcaagagaaggccttgtttgcagtccctaaaaattacaagctggtagctgca
ccactgtttgaactgtatgacaatgcacctggatatggacccatcatttctagtctcccc
cagcttttgagcaggttcaattttatatacaactga
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