Physeter macrocephalus (sperm whale): 102984694
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Entry
102984694 CDS
T06011
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102984694 (TSEN34)
Enzymes [BR:
pcad01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
102984694 (TSEN34)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
102984694 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
102984694
NCBI-ProteinID:
XP_023988183
Ensembl:
ENSPCTG00005006932
UniProt:
A0A2Y9TF36
LinkDB
All DBs
Position
17:2974231..2980582
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AA seq
312 aa
AA seq
DB search
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL
AEIGAVTLVSAPRPDPRQHSLALASFKRQQEQGFQEQSALAAEARETRRQELLEKIAEGQ
AAKKQKLEQKSGTSGSQEAGGNQAAEENEASAGQAAGEHEEAGEGSSSPQPGPSNGVAPL
PRSALLIQLATARPRPIKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAG
KFGGDFLVYPGDPLRFHAHYIAQCWAPGDPIPLQDLVSAGRLGTSVRKTLLLCSPQPDGK
VVYTSLQWASLQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtggaggtggcgaacggccgctccctggtgtggggggccgaggcggtgcag
gcgctgcgggagcgcctgggagtagggggccgcacggtgggcgccctgccccgcggaccc
cgccagaactcgcgcctgggcctcccgctgctgctgatgcccgaagaggcgcggctgctg
gccgagatcggcgcggtgaccctagtcagcgccccgcgcccggatccccgccaacacagc
ctggcattggcatccttcaagcgccagcaagaacagggcttccaggagcaaagtgctctg
gcagctgaggcccgtgagacccgtcgtcaggagctcctagagaagattgcagagggtcag
gctgcgaagaagcagaagctggaacagaaatcagggaccagcgggagccaggaggccggt
gggaaccaagctgcagaagagaatgaggccagcgctggccaggctgctggagagcacgag
gaagcaggtgaaggctcctcctctccccagccagggccttcaaatggggtggctcctttg
cccaggtctgctctgctcatccagctggccactgctaggcctcggcccatcaaagctagg
cccctggactggcgtgtccagtccaaggactggccccacgctggccgtcctgcccacgag
cttcgctacagcatctacagagacctgtgggagcgaggcttcttcctcagtgcggctggc
aagttcgggggcgacttcctggtctatcccggcgacccgctccgtttccacgctcactac
atcgctcagtgctgggctcccggggaccccatcccactccaggacctggtttctgctggc
cgcctcggcaccagtgtcagaaagacactgctgctttgctctccgcagcctgatggtaag
gtggtctacacatccctgcagtgggccagcctgcagtga
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