Physeter catodon (sperm whale): 102984827
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Entry
102984827 CDS
T06011
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X3
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
102984827 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102984827 (XRCC5)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
102984827 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
Motif
Other DBs
NCBI-GeneID:
102984827
NCBI-ProteinID:
XP_023980503
Ensembl:
ENSPCTG00005017451
UniProt:
A0A2Y9SQD4
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Position
2:118378095..118477863
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AA seq
739 aa
AA seq
DB search
MARSGNKAAVVLCMDVRFTTSNSLPGEESPFELAKKVMTMFVQRQVFAESKDEIALVLFG
TDGTENALAGEDQYQNITVHRHLKLPDFDLLEDIESKIQPGSQQADFLDALVVCMDLIQQ
ETVGKKFEKRHIEVFTDLSSPFSRDQLDIIIHNLKKSGISLQFFLPFPVGKKDGTGDRGD
GNLLSDHHGPSFPLKGISEQQKEGIRLVKKVMMSLEGEDGLEEIYSFSESLRQLCVFKKI
ERRSVPWPCQLTIGSNLSIKIVAYKSILQEKVKKCWTVVDARTQKKEDIQKETVYCLNDD
DETEVPKEDTIQGFRYGSDIIPFSKVDEEQMKYKLEGKCFSVLGFCRSSQVHMKYFMGNQ
VLKVFATKDDEAAAVALSSLIHALDELDMVAVVRYAYDRRANPQVGVAFPYIRDFYECLV
YVQLPFMEDLRQYMFSSLKNNRKCTPTEAQLSAVDALIDSMSLVKKDEEEGTIEDLFPTS
KIPNPQFQRLFQCLLHRALHPQEPLPPVQQHVLNMLDPPTEVTAKCQVPVSKIKTLFPLT
EVLKKKDQVTAQDIFQDNHEEGPTSKKLKTEGDEAHFSVCSLAEGSVTRVSRTCLVGSVD
PAENFRVLVRQKKTSFEEASHQLINHIEQFLDTNETLYFMKSMDCIRVFREEAIQFSEEQ
HFNSFLKALREKVEVKQLNHFWEIVIQDGITLITKDEASGSSVTAEEAKKFLAPKEYPDE
DTAAECEEGGDVDDLLDLI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtcggggaataaggcagctgtggtgctgtgtatggatgtgcgttttaccacg
agtaactcccttcctggtgaagaatccccatttgaactagcaaagaaggtgatgaccatg
tttgtgcagcgacaggtgtttgctgagagcaaggatgaaattgcgttagtcctttttggt
acagatggcactgagaatgcccttgctggtgaggaccagtatcagaacatcacagtgcac
agacacctgaagctgccagattttgacttgctggaggacattgaaagcaaaatccaacca
ggttctcaacaagctgactttctggatgccctcgttgtgtgcatggatttgattcaacaa
gaaactgtaggaaagaagtttgagaagaggcatattgaagtgttcactgacctcagcagc
ccattcagcagagatcagctggatattataattcataacttgaagaaatctggcatctcc
ctgcagttttttttgcctttcccagttggcaagaaagatggaactggggacagaggagat
ggcaacttgctctcagaccaccatgggccctcctttcctctaaaaggaatcagtgagcag
caaaaagaaggtattcggctggtgaaaaaggtgatgatgtctttagaaggtgaagatggg
ctggaggaaatttattccttcagtgagagtctgagacagctgtgtgtctttaagaaaatt
gagaggcgttccgtgccctggccctgtcaactgaccattggctccaatttgtctataaag
attgtggcttataaatcgattctacaagagaaagttaaaaagtgttggacagttgtggat
gcaagaactcaaaaaaaagaagatatacaaaaagaaacagtttattgcttgaatgacgat
gatgaaactgaagttccaaaagaggatactattcaagggttccgctatgggagtgatatc
attcctttctctaaagtggatgaggaacaaatgaaatataaattggaggggaagtgcttc
tctgttttgggattttgtagatcttctcaggtccacatgaaatattttatgggaaatcaa
gttctaaaggtctttgcaacaaaagatgatgaggcggcagcagttgccctttcctccctg
attcatgctttggatgaattagacatggtggccgtagttcggtatgcttatgacagaaga
gctaatcctcaagttggcgtggcttttccttatatcagggacttctatgagtgtttagtg
tacgtacagctgcctttcatggaagacttgcggcagtacatgttttcatccttgaaaaat
aataggaaatgcactcccacagaggcgcagttgagtgctgttgatgctttgattgactcc
atgagcttggtaaagaaagatgaagaggagggcaccattgaagacttatttccaaccagc
aaaatcccaaatcctcaatttcagaggttatttcagtgtctgctgcacagagctttacat
ccccaggagcctctgcccccagttcagcaacacgttctgaatatgctggatccccccact
gaggtgacagctaaatgtcaggttcctgtctctaaaataaagacccttttccctctgact
gaagtcctcaagaaaaaggaccaagtgactgctcaggacattttccaagataaccatgaa
gagggacccacctctaaaaaactgaagaccgagggagatgaagcccactttagtgtctgc
agcctggctgaaggcagtgtcacccgtgtgagcagaacttgtctggttggaagtgtggat
cctgctgaaaacttccgtgttctagtgaggcagaagaagaccagctttgaggaagcaagt
caccagttaataaatcacattgagcagtttttggatactaacgaaacactgtattttatg
aagagcatggactgtatcagagtcttccgggaggaagccattcagttttcagaagagcag
cactttaacagtttcctgaaagcccttcgagagaaagtggaagttaaacaattaaatcat
ttctgggaaattgtcatccaggatggaattactctgatcaccaaagatgaagcctctgga
agctctgttactgctgaggaagccaaaaagtttctggcccccaaagaatatccagatgaa
gacacagcagctgaatgtgaggaaggtggtgacgtggatgatttgctggacttgatttag
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