Physeter macrocephalus (sperm whale): 102985139
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Entry
102985139 CDS
T06011
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102985139 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102985139 (WDR33)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102985139 (WDR33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_EIPR1
Collagen
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
102985139
NCBI-ProteinID:
XP_007127121
Ensembl:
ENSPCTG00005001790
UniProt:
A0A2Y9FQD7
LinkDB
All DBs
Position
2:complement(35726183..35832476)
Genome browser
AA seq
1334 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGMQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMLGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
PQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGR
RPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASD
ETARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGHEHFRDAARPE
HPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPSEDRGGKGR
GGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMNSG
PPRRGASRGGGRGR
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccag
gcacctcgacagctattttataagcgacctgattttgcacagcagcaagcaatgcaacag
cttacctttgatggaaaacgaatgagaaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatctggttccacctattgggatgttgaat
aatcctatgaatgcagtaacaacaaagtttgttcgaacatcaacaaataaagtaaagtgt
ccggtatttgttgttaggtggactccagaaggaagacggttagtcactggagcatctagt
ggagagttcaccttgtggaatggactcactttcaattttgaaacaatattacaggctcac
gatagcccagtgagagccatgacttggtcacataatgacatgtggatgttgacagcggac
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcacggtgctgatgtgaagtgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaggtgaaattaaatctcaatggt
aactggctactcacagcatcacgtgaccacctctgtaaacttttcgacatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagctacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggctctttgttattctggcat
gttggggtagagaaagaagtgggtgggatggagatggcccatgaaggaatgatttggagt
ctggcttggcatcctcttggacatattctctgctcaggctcaaatgaccatactagcaaa
ttttggacccgaaaccgaccaggtgataaaatgcgagatcgatacaatctaaacctgttg
cctggaatgtctgaagatggagtggaatacgatgaccttgaacctaatagcctggcagta
attccagggatgggaataccagaacaactaaaattagccatggaacaagaacagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttagattggggaatggaggag
gtgatgcaaaaggatcagaaaaaagtacctcagaagaaagttccttatgcaaaacctatt
cctgctcagtttcagcaggcttggatgcaaaataaagttccaattcctgccccaaacgag
gtattgaatgatagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
atcgaacaagagatggccacattacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctcctgggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagcctcatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttaggccccctggaccccagggacaaatgggaccacagggtcct
ccactgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccaccccaggggttgccgaggcctcaggacatgcatgggccccaaggaatgcaaaggcat
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggcaattctggt
cctcaaggtcatatgggtcctcagggcccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacttgggccctcagggacctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctccccatcctcatgggatgcaaggt
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagagaaccagggtcctgctccccaaggg
atgatgctgggccacccacctcaagagatgagaggacctcatcctccaagtggactgctg
ggacatggccctcaggagatgcgaggtcctcaggagatgcgaggcatgcaggggcctcca
ccccaaggatcaatgctgggccctccccaggaattgcgagggcctccaggctcacaaggt
cagcaggggccgccccagggctctttgggacctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaaccag
gaaggacagaacgcaggccccccacccctgataccaggcctagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgactcacgt
ggccctccgaaccatcacatgggcccaatgtcagagagacgacacgagcagagcagcggg
cccgagcacggtcccgagaggggtcctttccggggcggccaggactgcaggggtccccct
gataggcgcggccctcaccccgacttccccgatgacttcagcagaccagatgacttccac
cccgacaagcgctttggccaccggttacgtgaatttgaggggcgaggaggacctttaccg
caagaagagaagtggaggcgtgggggccctgggcctccgtttcctcctgatcacagggag
ttcagtgagggggatggccggggcgcggcccggggccctccaggggcgtgggaaggccgc
agacctggagacgagcgcttcccccgggatcctgaggacccacggtttcgagggcgcaga
gaagaaagcttcaggcgaggagcccccccgagacatgagggccgtgctccccccagagga
agggatggttttcctggtcccgaagactttggaccggaggagaattttgatgcttctgat
gaaacagcccgaggaagagatctcagaggtcgaggtcggggtaccccacgaggaggaagg
aagggtttacttcccactcctgatgagttccctcgctttgaaggaggtcggaaaccagac
tcctgggatggaaatagagagccaggtcacgaacatttccgtgatgccgcccgtcctgaa
catccccctcacgacggccactccccagctagcagagaacggtcctcttctctccaaggc
atggacatggcatccctaccaccccgaaagcgcccctggcatgatgggccaggaacctct
gagcacagagaaatggaagccccagggggtccttctgaggatcgaggaggcaaaggccga
gggggccccggaccttctcagagagtgccaaagtccggacgttccagctccttggatgga
gatcaccatgatggataccacagggatgaaccttttgggggccctccaggcagtggtacc
ccttctagagggggccggagtggcagtaactggggtagagggagtaacatgaactctggc
ccgccaaggcgaggagcttcaagggggggtggaaggggtcggtag
DBGET
integrated database retrieval system
