Physeter macrocephalus (sperm whale): 102985660
Help
Entry
102985660 CDS
T06011
Symbol
DDX50
Name
(RefSeq) ATP-dependent RNA helicase DDX50 isoform X3
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102985660 (DDX50)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102985660 (DDX50)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102985660 (DDX50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
102985660
NCBI-ProteinID:
XP_007121105
Ensembl:
ENSPCTG00005006309
UniProt:
A0A2Y9FEJ4
LinkDB
All DBs
Position
20:21170430..21204155
Genome browser
AA seq
741 aa
AA seq
DB search
MMPGKLLWGDIMELEAPLEETESQRKERQKSDRRKSRHHYDSDEKSETRENGVADDLDAP
KPKKAKMKEKLNGDTEEGCNRLSHEFSKSHKSRRKYLSNGDIDEYEKKSKRVSSLDSSTH
KSSDNKLEETLTCERKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIA
QARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITKKLS
VACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLG
FAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAA
TTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLH
GDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRT
GRAGRTGICICFYQPRERGHLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSY
AAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFMTMTLESPEEIQ
DVSCAWKELNRKLSNNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWVLSVPA
KLPEIEEYYDGSTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRR
RSGNRNRSRSGGHKRNFDWDS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgggaaactcctctggggggacattatggagctggaggcacctttggaggag
accgagagccagaggaaggagaggcaaaagagtgatagaaggaagtcaaggcaccattat
gactcagatgagaaatcagaaacaagagaaaatggtgttgcagatgacctggatgctccc
aaacccaaaaaagctaaaatgaaagagaaactaaatggtgacactgaggaaggatgtaat
agactttcacatgaattttctaaatctcataagtcaagaagaaaatatctgtcaaatgga
gatattgatgaatatgaaaaaaaatcaaagcgagtgtcatccttagatagttctactcat
aaatcaagtgataataaactagaagagaccctaacatgtgaacggaaagaaggagccttc
tccaatttccctatttctgaagagactataaagcttctgaaaggtcgaggggtaacatat
ctctttcctattcaagttaagacttttggtcctgtatatgaaggaaaagatttaattgct
caagcgcggacaggaacaggaaagacattctcttttgccatccccttgattgaaagactc
caaagaaatcaagagacaattaaaaaaagccgctcaccaaaggtacttgttttggctcct
acaagggaactggcaaaccaagtagccaaagacttcaaagatataactaagaaactcagt
gtggcgtgtttttatggtggaacatcatatcaaagccaaattaatcatattcgaaatggt
attgacatcttagttgggacccctggtcgtatcaaagatcatctgcagagcggccgatta
gatctttctaaactgcgccacgttgtgcttgatgaagtggatcaaatgttagatttaggt
tttgctgaacaagttgaagatattatccacgaatcctacaaaactgattctgaagacaat
cctcagactttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaa
tacatgaaatccagatatgaacaggttgaccttgttgggaaaatgactcaaaaggctgca
actactgtggaacatctggccatccagtgccattggtctcagaggccagcagttattgga
gatgtccttcaagtctacagtgggtctgaagggagggctattatcttctgtgagaccaaa
aagaatgtaactgaaatggccatgaatccacacataaaacagaatgcccagtgtttacat
ggtgatattgcacagtcacaaagagaaattacgctgaaaggcttcagagagggtagtttt
aaagttttggtggcaaccaatgtggctgcccgtggtttggacattcctgaggttgacctg
gtgattcagagttcacctccacaggatgttgagtcctatattcatcgctctggacgcaca
ggtagagctggccggacagggatttgcatatgtttttatcaaccaagagaaagaggtcac
ttaagatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgttccttctaca
atggatttagttaaatctaaaagcatggatgccatcaggtctctggcttccgtttcttat
gctgctgttgattttttccgaccatcagctcagagactgatagaagagaaaggggcagtg
gatgcattggctgcagcattagcccacatctctggcgcatcaagttttgaaccacgttct
ttgatcacctctgataaggggtttatgaccatgactctggaaagcccagaagaaatacag
gatgttagctgtgcttggaaagaacttaacagaaagctgagtaataatgcggtgtcccaa
attaccagaatgtgcctcctaaaaggaaatatgggtgtttgctttgatgttcccacaact
gagtcagaaaggttacaggcagagtggcatgattcagactgggtactctcagtgccagcc
aagttgcctgaaattgaagaatattatgatggaagcacatcttctaattccagacagagg
agtggctggtcaagtggccggtcaggccggtcgggccggtcaggtggtcgatctggtggc
cggtcaggtagacagagtcgacaggggagtcggtcaggaagtcgacaagatggtagaaga
cgaagtgggaacagaaatcgatcgagaagcgggggccacaaacggaattttgactgggat
agttaa
DBGET
integrated database retrieval system
