Physeter macrocephalus (sperm whale): 102985673
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Entry
102985673 CDS
T06011
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03022
Basal transcription factors
pcad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102985673 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
102985673 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102985673 (ERCC3)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102985673 (ERCC3)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102985673 (ERCC3)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102985673 (ERCC3)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102985673 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
102985673
NCBI-ProteinID:
XP_023970800
Ensembl:
ENSPCTG00005001437
UniProt:
A0A2Y9S3R0
LinkDB
All DBs
Position
2:complement(35230284..35266839)
Genome browser
AA seq
782 aa
AA seq
DB search
MGKRDRADREKKKSKKRHYEDEEDDEDDAPGNDSQEAVPSAAGKQVDESGTKVDEYGAKD
YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPMIRECRLRNSEGEATELITETFTSKSAIAKSAEGSGGPSTSRVTDPQG
KSDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLVKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLANMEEEELAFSTKGEQQQLLQKVLAAT
DLDAEEEVVAGEFGSKSSQVSRRFGTMSSMSGADDTVYMEYHSSRSKASTKHVHPLFKRF
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaagggaccgggcggaccgcgagaagaagaagtccaagaagcggcactacgag
gatgaggaagacgatgaagacgacgcccctgggaacgactctcaggaagcggttccctcg
gcggccgggaagcaggtggatgagtccggcaccaaagtggatgagtatggagccaaggac
tacaggctgcagatgccgctgaaggacgaccacacctccaggcccctctgggtggctcct
gatggccacatcttcttagaagccttctctccagtttacaaatatgctcaagacttcctg
gtggctattgcagagccggtgtgccgaccaacccacgtgcatgagtacaaactaactgcc
tactccctgtacgcagctgtcagcgttgggctgcaaactagtgacatcactgagtacctt
aggaagctcagcaagacgggagtccctgatggaattattcagtttattaagttatgtact
gtcagctatgggaaagtcaagctagtcctgaagcacaacaggtacttcgttgaaagttct
caccctgatgtcatccagcatcttctccaggaccccatgatccgggaatgccgcctgagg
aactctgagggggaggccaccgagctcatcacagagactttcacaagcaaatctgctatc
gctaagagtgctgaaggcagtggtgggccatccacttcccgggtgacagatccacagggt
aaatctgacatccccacggacctgtttgacttttatgagcaaatggacaaggatgaggag
gaagaagaagagacacagacagtgtcttttgaagtcaagcaggaaatgattgaggaactc
cagaaacgttgcatccacctggagtaccctctgttagcagaatacgacttccggaatgat
tctgtcaaccctgacatcaacattgacctgaaacccacagctgtccttagaccttatcag
gagaagagcttgcggaagatgtttgggaatgggcgcgcacgttccggggtcatcgtcctt
ccttgtggtgctgggaagtccttggttggcgtgacagctgcgtgcacagtcagaaaacgc
tgcctggtgctgggcaactcagctgtgtctgtggagcagtggaaagcccagttcaagatg
tggtccaccatcgacgacagccagatctgccgctttacctccgacgccaaggacaagccc
ataggctgctccattgccatcagcacctactccatgctgggccacaccaccaaaaggtcc
tgggaggccgagcgggtcatggagtggctcaaaactcaggagtggggcctcatgatcctg
gatgaagtacacaccataccagccaagatgttccgacgggtgctcaccattgtgcaggcc
cactgcaaactgggcttgaccgcaaccctcgtccgggaagatgacaaaattgtcgactta
aattttctgattgggcccaagctctatgaagccaactggatggagctgcagaacaacggc
tacatcgccaaggtccagtgcgctgaggtttggtgcccgatgtctcctgagttttaccgg
gagtatgtggcaatcaaaaccaagaagcgaatcttgctatacaccatgaaccccaacaaa
ttcagagcttgccagtttctggtcaagtttcatgaaaggaggaatgacaagattattgtt
tttgctgacaacgtgtttgctctgaaggaatatgccattcgactgaacaaaccctatatc
tatggtcctacatcacagggagaaaggatgcagattcttcagaatttcaagcataacccc
aaaatcaacaccatcttcatatccaaggtgggtgacacatcgtttgatctgccagaagca
aatgttctcattcagatctcatctcatggtggctcccggcggcaggaggcccagaggctg
gggcgagtgctccgagcaaaaaaagggatggttgcagaggagtacaatgccttcttctac
tcactggtgtcccaggatacacaggaaatggcttactcaaccaagcggcagaggttcttg
gtagatcaaggttatagctttaaggtgatcacaaagcttgccaacatggaggaggaagag
ttggcattttccacaaaaggggagcaacagcaactcttacagaaggtcctggcggccact
gacctggatgctgaggaggaggtggtggcgggagaatttggctccaaatccagccaggtg
tctcggcgcttcggcacgatgagctccatgtctggggccgacgacacagtgtacatggag
taccactcgtcacggagcaaggcttccactaagcatgtgcacccgcttttcaagcgcttc
aggaaatga
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