Physeter macrocephalus (sperm whale): 102985779 Help Entry 102985779         CDS       T06011                                  Symbol SYMPK Name (RefSeq) symplekin   KO K06100   symplekin Organism pcad  Physeter macrocephalus (sperm whale) Pathway pcad03015   mRNA surveillance pathway pcad04530   Tight junction Brite KEGG Orthology (KO) [BR:pcad00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     102985779 (SYMPK)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     102985779 (SYMPK)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcad03021]     102985779 (SYMPK)    03019 Messenger RNA biogenesis [BR:pcad03019]     102985779 (SYMPK) Transcription machinery [BR:pcad03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      102985779 (SYMPK) Messenger RNA biogenesis [BR:pcad03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      102985779 (SYMPK)     U7-dependent histone pre-mRNA processing factors      102985779 (SYMPK) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Motif Other DBs NCBI-GeneID:  102985779 NCBI-ProteinID:  XP_007102778 Ensembl:  ENSPCTG00005012494 UniProt:  A0A2Y9EIN6 LinkDB All DBs Position Unknown AA seq 1275 aa AA seqDB search MAGSSGDSVTRRSVASQFFTQEEGPGVDGMTTSERVVDLLNQAALITNDSKITVLKQVQE LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN LKLHLLNVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM KLEPNLGEDDEDKDLEPGPSATSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV YLPEVMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGAAGTLDKYEDCLIRLLSGLQEKPDQK DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSSKCDMK SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR SFTPHQQAHIPNSIMTILEASGKQEPETKEAPAGPLEEDDLEPLALAPPPAPRAPQDLIG LRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSSSSARPGPPQPEEAIDFREEGPECE TPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAAGGLISKEERSPQTLTPAGEDTVKTPS PTAEEAGEPETKGNS NT seq 3828 nt NT seq  +upstreamnt  +downstreamnt atggcaggcagcagtggggacagcgtcactcgccggagcgtggcatcacagttttttaca caagaggaggggccgggcgttgatggcatgaccacatcagagagagtggtggatctcctc aaccaggcagcactgatcaccaatgattcaaagatcacagtgctcaaacaggtccaggaa ctgatcatcaacaaagatcccacactactggacaacttcctggatgagatcatcgctttc caagcagacaagtccattgaagtgcgcaagtttgtcatcggcttcatcgaggaggcatgc aagcgagacattgagttactgctgaaactgatcgcgaatctcaacatgctcttgagagat gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc ctgcagtggatggtgaagtcacgggtgatcagcgagctccaggaagcctgctgggatatg gtgtctgccatggctggggacatcatcctgctgttggactctgacaatgacggcatccgt acccatgccatcaagtttgtagagggcctcattgtcaccctgtctccccgcatggctgac tcggaggtgccccgacgccaggagcacgacatcagcctggaccgcatccctcgtgaccat ccctatatccagtacaatgtgctgtgggaagaaggcaaggcagccttagagcagttgctc aagttcatggtgcaccccgctatctcctctatcaacctgaccacagccctgggctccctc gccaatattgcccgccagaggcccatgttcatgtctgaggtgattcaggcctatgaaacc ctgcacgccaacctgcccccaacgctggccaaatctcaggtgagcagcgtgcgtaagaac ctcaagttgcacctgttgaatgtgctgaagcacccagcctccttggagttccaggctcag atcaccaccctgctggtagacctgggcacacctcaggctgagatcgcccgcaacatgccc agcggcaaggacgcccgcaagcggccccgagatgactcagattccacgctcaagaagatg aagcttgagcccaacctgggggaagacgacgaggacaaggacttggagccaggcccctca gcaacctcgaaggcctcagcccagatctcaggccagtcagacacagatatcacagccgag ttcctacagcctctgctgacacctgacaatgtggccaatctggtcctcatcagcatggtg tacctgcccgaggtcatgcccgcctccttccaagccatctacaccccagtggagtcagca ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacggccgca ggactggggccaggagtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag gtggtgaagccggagagtgtcctgatcaagcggcgcctgtcagctcagggtcaggccatc tcggtagtgggctccctgagctccatgtccactctggaggaggaagcgccccaggccaag aggaggccagagcccatcatccccgtcacacagccccggctggcaggcgccggcgggcgc aagaaaatcttccgtcttagtgatgtgctgaagcccctgaccgacgcccaggttgaggcc atgaagctgggcgctgtgaagcggatcctgcgggctgagaaggccgtggcctgcagcggg gcagcccaggtgcgcataaagatcctggccagcctggtgactcagtttgactcgggcctg aaggctgaggtcctgtccttcatcctggaagatgtgcgggcccgcctggacctggccttt gcctggctctaccaggagtacaacgcctacctagcagctggtgccgcgggcaccctggac aagtatgaggactgcctcatccgcctgctctccggccttcaggagaagccagaccagaag gatgggatcttcaccaaggtggtactggaggcgccgctgatcactgagagtgccctggag gtgattcgcaagtactgtgaggatgagagtcgcacctacctgggcatgtccactcttcga gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc agctcccatgagaaggacaaggtgcgttcccaggccttgctgttcatcaagcgcatgtac gagaaggaacagctacgagagtatgtggagaagtttgccctcaactacctacagctcttg gtccaccccaacccgccatctgtgctctttggagccgacaaggacacagaggtggcagcg ccctggactgaggagacagtaaagcagtgtttgtacctctacctggccctcctgcctcag aaccacaagctgatccatgagctggcagccgtgtatactgaggccatcgctgacatcaag aggacagtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcgcccgag ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgttgtctg cacagcctcacggacaaagtcccaccctccccagagctggtgaagcgggtccgggatctc taccacaagcgactgcccgacgtccgcttcctcatccctgtgctcaatgggctggaaaag aaggaagtgatccaggccctgccaaagctcatcaaactcaaccccatagtggtgaaagag gtcttcaaccgcctgctgggcacccagcacggtgaagggaactcagccttgtcccccctg aaccctggagagcttctcatcgcattacacaacatcgactcctcgaagtgtgacatgaag tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacatcggaggtg ctggccgtggtgatgcagcagctgatggagcagagtcccctgcccatgctgctcatgagg accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcctt tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag tgctgtcaacgcaccaagccccagagcttccaggtcatcctgcagctcccaccccagcag ctgggtgccgtctttgacaagtgcccggagctccgggagcccctgctggcccacgtccgt tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc agcggcaagcaagagccagagactaaggaagcacctgccgggcccctggaagaggatgac ttagagcccctggccctggcaccgcccccagccccccgcgcccctcaagacctcatcggc ctgcggctggcccaggaaaaggccttaaagcggcagctggaggaggaacagaagctgaag cctgggggagtgggagccccctcctcgtcctcctcgtcgttgtcctcttcctcggcccgg ccaggccctccccagccggaggaagccattgatttccgggaggaggggcctgagtgcgag accccggccatcttcatcagcatggatgatgactcggggctgactgaggctgcactgctg gactctagtcttgagggacccctacctaaggaagctgcagcgggcggattgatttcaaag gaagagcggagcccccagaccctcacccctgccggagaagacaccgtgaagactcccagc cccactgctgaggaagccggggaacccgagaccaaggggaacagctga

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