Physeter macrocephalus (sperm whale): 102986003
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Entry
102986003 CDS
T06011
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102986003 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102986003 (COPB2)
Membrane trafficking [BR:
pcad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102986003 (COPB2)
Exosome [BR:
pcad04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102986003 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD40_2
Beta-prop_LRRK2
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
102986003
NCBI-ProteinID:
XP_007113430
Ensembl:
ENSPCTG00005000143
UniProt:
A0A2Y9F221
LinkDB
All DBs
Position
1:complement(29162740..29192884)
Genome browser
AA seq
906 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWAVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRSASQQELDGKPASPTPVIVAPPTDNKEEKSLLELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgactcgatatcaagagaaagctaactgctcgatctgatcgagttaagagt
gtggatttgcatcctacagagccatggatgttggcgagtctttacaatggcagtgtgtgc
gtttggaatcatgaaacacagacactggtgaaaacatttgaagtatgtgatcttcctgtt
cgagctgccaagtttgttgcgaggaagaattgggctgtgacgggagcggatgacatgcag
attagagtgttcaactacaacactctggagagagttcatatgtttgaagctcattcagac
tacattcgctgtattgctgttcatccaacccagcctttcattctaactagcagcgatgac
atgcttattaaactctgggactgggataaaaaatggtcttgttcacaagtgtttgaagga
cacacccattatgttatgcagattgtgatcaaccccaaagataacaatcagtttgccagc
gcttctttggacaggactatcaaggtgtggcagctgggttcctcgtcaccaaacttcact
ctggagggacatgaaaaaggtgtgaactgcattgattactacagtgggggcgacaaacca
tacctcatttcaggtgcagatgaccgtcttgtgaaaatatgggactatcagaataaaaca
tgtgtacagacactggagggacacgcccaaaatgtgtcttgtgccagttttcatcctgag
ctgccaattatcatcacaggttcagaagatggaaccgtgcgtatttggcattcaagcacc
tatcgccttgagagcacattgaattatggcatggagagggtatggtgtgtggccagcctg
cgagggtccaacaacgttgctttgggctatgatgaagggagcatcattgtgaagcttggt
cgggaggagcctgccatgtccatggatgccaatggaaagataatttgggccaaacattca
gaagtccagcaggccaacctaaaagcaatgggagatgctgaaattaaagatggagaaaga
ttgccactggcagtaaaggatatgggcagttgtgaaatataccctcagactatccagcac
aatcctaatgggcggtttgttgtggtgtgtggtgatggcgaatatatcatctacacagca
atggcactgagaaacaagagctttgggtctgcccaggagtttgcgtgggcccacgattct
tcagaatatgcaataagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcttactggga
gtcagatctgtaaatggcttagctttctatgactgggacaatacagaactcatacgcaga
attgaaattcagcccaaacacattttctggtctgactctggagagctagtctgtattgcc
actgaagagtcattttttatccttaaatatctgtcggaaaaagttttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagatggctttgaagttcttggtgagatt
caggaaattgtgaaaacagggctgtgggtaggcgactgcttcatttacacaagttctgtg
aacagattaaattattatgtcggaggagaaatagtcaccattgcccacttggacaggacg
atgtatctcctgggctatattcctaaagacaacaggctttatctgggggataaggaactc
aacatcgttagctactccctgctggtttcagtgctggaataccagacggccgtcatgcgg
agagacttcagcatggctgataaggtccttccgaccataccgaaagagcagaggaccaga
gttgctcactttttggaaaagcagggcttcaagcagcaagctcttacagtatccacagac
ccagagcatcgctttgaacttgctcttcagcttggagaactaaaaattgcataccaatta
gcagtggaagcagagtcagaacagaagtggaaacaacttgcggaacttgccattagtaaa
tgccagtttggcctagcccaggagtgcctgcaccatgcacaggattatgggggtctgttg
cttttggccactgcctctggaaatgctactatggtgaacaagctagcagagggtgcggag
agagacggcaagaataatgtggcattcatgagctactttttacagggcaagcttgatgct
tgcctagagctcttgattagaactggacgactgccagaagctgccttcctggcacggact
tacttacccagtcaggtttcaagggtggtgaaactctggagagaaaatctctcaaaagtc
aatcagaaagcagcagaatcccttgctgatccaacagaatatgaaaacctttttcctgga
ttaaaagaagccttcgttgtcgaagaatgggtgaaggaaacacatgctgacctgtggccg
gccaaacaatacccacttgtcacgccaaatgaagaaagaaatgttatggaagaggcaaaa
ggctttcagccctcaagatctgcatctcagcaggaacttgatgggaaacctgcttctcct
actcctgttattgtggccccccccacagacaacaaagaagaaaagagtttacttgaactg
gaagtagatttggataatttggaattagaagatattgacacaacagatatcaacctggat
gaagatattttggatgactga
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