Physeter macrocephalus (sperm whale): 102986034
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Entry
102986034 CDS
T06011
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102986034 (CHD5)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102986034 (CHD5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
102986034
NCBI-ProteinID:
XP_054938142
Ensembl:
ENSPCTG00005000480
UniProt:
A0A9W2WG31
LinkDB
All DBs
Position
3:complement(27861497..27923852)
Genome browser
AA seq
2040 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLEGFDDFFPEEPVSLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEELEEKSDSEGSDYSPNKKKKKKLKDKKEKKAKRRKKDDDE
DDNDDGGLKEPKSSGQLMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVAIAPPLAISPQQAPQPVPVR
KAKTKEGKGPGVRKKIKGSKDVKKKGKGRKVAGLKFRFGGVGSKRKKGSSSEEEEREESD
FDSASIHSSSVRSECSALLGRKSKRRRQKKRIDDGDGYDTDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDDDEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGSDVEPGVPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEVDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYQIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPATPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKTEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISSDPTTPVPASPAHLLP
APLGLPDKMEAQLGYLEEKELGVQKPKKPPEIQALPAALDRAEGEGKHENSDGKERAREE
RLEEMEKAQPSPEQLPKEEVLAEKEKILDKLELSLIHSRGDGSDFRPDDTKAEEKEPIET
QQNGDKEEDEEGKREDKIGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSS
QMYSNNFGPNFRGPGPGGIVNYNQMPLGPYVTGRCPSASGRHGRGRPRGPRQAELSSLCR
RYLAVPEMSLCCRARFQWSRASRAPCPTPAGEKSCRLSRATPPEDRKGNGEMPPRGDEAT
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtggccttgaaggcttcgatgactttttc
cctgaggagcccgtgagccttcccaagaagaagaagtccaagaagctcaaggagaacagg
tccaaagggaagaggaagaagaaagaggggagcaatgatgagctgtcggaaaatgaagag
gagctggaggagaagtcggacagcgagggcagtgactactccccaaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagccaagcgaagaaagaaagatgatgacgag
gacgacaacgacgacggaggcctcaaggagcccaagtcctcggggcagctcatggccgag
tggggcctggacgacgtggactacctgttctcggaggccgactatcacacgctgaccaac
tacaaggccttcagccagttcctcaggccactcatcgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgtcctgggcgccaagtggcgagagttcagcgccaacaacccc
tttaagggcagctcggcggcggcagccgcggcggcagtggccgcggctgtggagacggtc
gccatcgcgcctccgctggccatcagcccccagcaggcaccccagcctgtgcccgtccgc
aaggccaagaccaaggagggcaaggggcctggagtgaggaagaagatcaaaggctccaag
gatgtgaagaagaagggcaaagggagaaaggtggccgggctcaagttccgcttcggaggg
gttggcagcaagaggaagaaaggctcctcgagcgaggaggaggagcgggaggagtcggac
ttcgacagcgccagcatccacagctcctccgtgcgctccgagtgttctgccctgctgggg
aggaagagcaagaggaggcgccagaagaagagaattgatgatggtgatggctatgacacg
gaccaccaggactactgtgaggtgtgccagcagggtggggagatcatcctgtgcgacacc
tgcccgagggcctaccacctcgtctgcctggacccagagctggagaaagcccccgagggc
aagtggagctgtccccactgtgagaaggaggggatccagtgggagccgaaggacgacgac
gacgacgacgacgagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcctcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccgctgaagggcaaagtccagcggatcctgcactggaggtggacagagccc
ccagcccccttcatggtggggctgccggggtccgacgtagagcctggcgttccaccaccc
aagcccctagagggcatcccggagagagagttctttgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctacagctggagctctaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggacgagccaccgccctttgactacggatctggcgat
gaggatggcaagagcgagaaaagaaagaacaaggaccctctctacgccaagatggaggag
cgcttctaccgctatggcatcaagcccgagtggatgatgatccaccgcatcctgaaccac
agcttcgacaaaaagggggatgtgcattacctgatcaagtggaaagacctgccctacgac
cagtgcacctgggaggttgacgacattgacatcccctactacgacaacctgaagcaggcc
tactggggccacagggaattgatgctgggggaggacgccaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggacgacaaacaggagaagcccccggacacgcccattgtg
gatcccacggtcaagtttgacaagcagccgtggtacatcgactccacgggcggcacactg
cacccgtaccagctggagggccttaactggctgcgcttttcctgggcccagggcaccgac
accatcctggccgatgagatgggtctgggcaagacagtgcagaccatcgtcttcctctac
tccctgtacaaggagggccactccaaggggccctacctggtcagcgcgcccctgtccacc
atcatcaactgggaacgcgagtttgagatgtgggcgcccgacttctacgtggtcacctac
acgggggacaaggagagccgctctgtgatccgggagaacgagttctcgtttgaggacaac
gccattcggagtgggaagaaggtgttccggatgaagaaagaagtgcagatcaaattccac
gtcctgcttacctcctacgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggatgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcctgaacagctaccagatcgattacaagctgctgttgacgggcaccccccttcag
aacaacctggaggagctcttccacctcctcaatttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgccgacatctccaaggaagaccagatcaagaagctg
catgacctgctggggccgcacatgctaaggcggctcaaggctgatgtattcaagaacatg
ccggccaagaccgagctgatcgtccgcgtggaactgagccagatgcagaagaagtactac
aagttcatcctcacgcggaacttcgaggcgctgaactccaaggggggcgggaaccaggtg
tcactgctcaacatcatgatggacctgaagaagtgttgcaaccacccttacctcttcccc
gtggctgctgtggaggcccctgtcctgcccaatggctcctatgatggcagctccctggtc
aagtcttcagggaagctcatgttgctgcagaagatgctcaagaaactgcgggacgaaggg
caccgtgtacttatcttctcccagatgaccaagatgctggacctcctggaggacttcctg
gagtatgagggctacaaatatgagcggattgatggtggcatcaccgggggcctccggcaa
gaggcgattgacagattcaacgcccctggggcccagcagttctgcttcctcctctcgacc
cgggcaggtggcctgggcatcaacctggccacggcggacacggtcatcatctacgactca
gactggaacccgcacaatgacatccaggccttcagccgtgcccaccgcatcgggcagaac
aagaaggtgatgatctaccgcttcgtgacgcgggcctcggtagaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgcggcctggcctgggctccaag
tccggctccatgaccaagcaggagctggacgacatcctcaagttcggcacggaggagctc
ttcaaggacgacgtggagggcatgatgtctcagggccagaggcccgccacgcccatccct
gatgtccagtcctccaaagggggagccctggccgccagcgcgaagaaaaagcacggcagc
accccgccaggtgacaacaaggacgtggaggacagcagtgtgatccactatgatgatgcg
gccatctccaagctgctggaccgcaaccaggacgccacggacgacacggagctgcagaac
atgaatgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggc
gtggaggaggtggagcgggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctccggcaccactatgaacagcagcaggaggacctggcccgcaacctgggc
aaaggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcggacaaccagtccgaatattccattggatccgaggacgaggac
gaggactttgaagaaaggccggaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcccctgcccccgcttctcgcccgggtcggcggcaacattgag
gtgctgggcttcaacgcccgacagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgcgggaagact
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gacggcgcggagaccttcgccgacggcgtgccccgcgagggcctctccaggcagcacgtg
ctcacgcgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcacgtc
aatgggaagtacagcaccccggatttgatccctgaggggcccgagggcaagaagccaggc
gaggtcatctcctcggatcccactacaccggtgcccgccagccctgcccaccttctgcct
gccccgctgggcctgccagacaaaatggaagcccagctgggctacttggaagagaaggag
ctgggggtgcagaagccaaagaagcccccggaaatccaggccctgccagctgccctggac
agagcggagggtgagggcaagcacgagaactcggatggcaaggagagggcccgagaggag
cgactggaggagatggagaaggcccagccctccccagagcagctgccgaaagaagaagtg
cttgctgagaaggagaagattctggacaagttggagctgagcttgattcacagcagaggc
gatggcagtgatttcaggccagatgacaccaaagccgaggagaaggagcccattgaaaca
cagcaaaatggtgacaaagaggaagatgaggagggaaagagggaggacaagatcgggaag
ttcaagttcatgttcaacatcgcagacgggggcttcacagagctgcacacactgtggcag
aatgaggaacgtgctgctgtgtcctcggggaaaatctacgacatctggcaccggcgccat
gactactggctgctggcgggcatcgtgacgcacggctatgcccgttggcaggacatccag
aacgacccgagatacatgatcctcaatgagcccttcaagtccgagatccacaagggcaac
tacctggagatgaagaacaagttcctggcccgcaggttcaagctgctggagcaggcgctg
gtcatcgaggagcaactccggagggccgcgtacctcaacatgacccaggaccccaaccac
cccgccatggccctcaacgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctgtccaaggagtccctcgccgggaacaagcctgccaacgccgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggcggatgtgacgcgcctgccctcc
atgctgtcccgcatccccccagtggccgcccgcctccagatgtcagagcgcagcatcctg
agccgcctgaccaaccgagccggggaccccaccatccagcagggcgctttcggctcttcc
cagatgtacagcaacaactttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgaccggtaggtgcccgtctgcttccggg
cggcatgggcgggggcgcccgcggggccccaggcaagccgagctctcctctctttgccgc
agatatctagccgtccccgagatgtccctctgctgccgggctcgtttccagtggagccgc
gcctcccgggccccctgcccgacccccgcaggagagaaaagctgccgcctttctagagcc
acgccacccgaggacagaaagggaaacggagaaatgccacctcgtggggacgaggccacc
tga
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