Physeter macrocephalus (sperm whale): 102986196
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Entry
102986196 CDS
T06011
Symbol
GABPB1
Name
(RefSeq) GA-binding protein subunit beta-1 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102986196 (GABPB1)
03029 Mitochondrial biogenesis [BR:
pcad03029
]
102986196 (GABPB1)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
102986196 (GABPB1)
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
102986196 (GABPB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
Ank_KRIT1
CCDC84
LAMTOR5
Motif
Other DBs
NCBI-GeneID:
102986196
NCBI-ProteinID:
XP_007115976
Ensembl:
ENSPCTG00005011636
UniProt:
A0A2Y9F675
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Position
11:88578546..88648439
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AA seq
395 aa
AA seq
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MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV
ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTGLVSSENSSKATDETGVSAVQFGNSSTSVLATLAALAEASAPLSNS
SETPVVATEEVVTAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVT
MPDGQQVLTVPATDIAEETVISEEPPAKRQCIEIIENRVESAEIEEREALQKQLDEANRE
AQKYRQQLLKKEQEAEAYRQKLEAMTRLQTNKEAV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggtagatttgggaaagaagcttttagaagcggctcgagcaggtcaagatgat
gaagttcgtattttgatggctaatggagctccttttactacagactggctgggaacttct
ccacttcatctggcagcacaatacggacattattccaccacagaagtactactccgagct
ggcgtaagtagggatgccagaaccaaagtggaccgaacgccgctgcatatggcagcttct
gagggccatgccagcatagtggaggttttgcttaagcatggtgctgatgtcaatgcaaag
gacatgttgaagatgacagctctacattgggccacagaacacaatcatcaagaggtggtg
gaactcttaatcaaatatggtgctgatgtacacacacaaagtaaattttgtaaaactgcg
tttgatatttcaatagacaatggaaatgaagatttagcagagatactacagattgctatg
cagaaccaaatcaacacaaacccagagagtcccgacactgtgacgatacatgctgcaaca
ccacagtttatcattggacctggaggggtggtgaacctaacaggtctggtatcttcagaa
aattcatccaaggcaacagatgaaacaggtgtatctgctgttcaatttggaaactcctct
acatcagtattagctacattagctgccttagctgaagcatctgctccattgtccaattct
tcagaaactccagtagtggctacggaggaagtagttactgcagaatctgtggatggtgca
attcagcaagtagttagttcagggggtcagcaagtcatcacaatagttacagatggaatt
cagcttggaaatttgcactccattccaaccagcggaataggtcagcccatcattgtgacc
atgccagatggacaacaagtattaacagtaccagcaacagacattgctgaagaaactgtt
ataagtgaagaaccaccagccaagagacaatgtattgaaataattgaaaaccgggtggag
tctgcagaaatagaagagagagaagctcttcagaaacagctggatgaagctaatcgagaa
gcacaaaaatatcgacagcaacttctaaagaaagaacaggaagcagaggcctacagacag
aaattagaagctatgactcgtcttcagactaataaagaagccgtttaa
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