Physeter macrocephalus (sperm whale): 102986342
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Entry
102986342 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04144
Endocytosis
pcad04530
Tight junction
pcad04666
Fc gamma R-mediated phagocytosis
pcad04810
Regulation of actin cytoskeleton
pcad05100
Bacterial invasion of epithelial cells
pcad05132
Salmonella infection
pcad05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102986342
09144 Cellular community - eukaryotes
04530 Tight junction
102986342
09142 Cell motility
04810 Regulation of actin cytoskeleton
102986342
09150 Organismal Systems
09151 Immune system
04666 Fc gamma R-mediated phagocytosis
102986342
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102986342
05135 Yersinia infection
102986342
05100 Bacterial invasion of epithelial cells
102986342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102986342
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcad04812
]
102986342
Membrane trafficking [BR:
pcad04131
]
Others
Actin-binding proteins
Arp2/3 complex
102986342
Cytoskeleton proteins [BR:
pcad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
102986342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_SPT8
Beta-prop_IFT140_1st
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
102986342
NCBI-ProteinID:
XP_054937176
UniProt:
A0A9W2WD36
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All DBs
Position
20:complement(1716545..1717740)
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AA seq
357 aa
AA seq
DB search
MPGTGIVPIALSPNNHEIHIYKNGRQWVKAHELKEHNGHITGIDCAPKSDRVITCRVDRN
AYVWGQKDGVWKPTLVILRINCAATFVKWSPLENKFAVGSGARLISVCYFESENDGWVSX
HIKKPIRSRVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEEPASMPWGSKMPFGHLM
SEFGGSGAGGWVRKFSFSASRSRLAWVSHDSTVSVADASKSMQISTLKTEFLPLLSVSFI
SENSVLAAGHDCCPMLFNYNDRGCLTFVSKLDIPKQSIRCNMSTMEHFRNMDKRATTEDH
NPALETLHQNTITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTLESSIQGLQIMCS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcctggaacagggatcgtacccattgcccttagccccaataaccacgaaatccacatc
tataagaacgggaggcagtgggtgaaagctcatgaactcaaggagcacaacggacacatc
acaggtattgactgcgctcccaagagtgaccgtgtcatcacttgcagggttgaccgcaat
gcctacgtctggggtcagaaggatggtgtctggaagccgaccctggtgattctgagaatt
aactgtgcagccacttttgtcaagtggtccccgctcgagaacaaatttgctgtgggcagc
ggagcacgactcatttctgtttgttacttcgagtccgaaaatgacgggtgggtaagctag
cacattaaaaaacccattcgctccagggtcctcagcttggattggcatcccaacaatgtc
ttgctggcagcaggatcctgtgatttcaaatgcagagtgttttctgcctacattaaagaa
gtggatgaggagccagccagtatgccctggggcagcaagatgccttttggtcatctgatg
tcagagtttggtggcagtggcgctggcggctgggtgcgcaagttcagcttctccgccagc
aggagccgcctggcctgggtcagccacgacagcaccgtgtccgttgccgatgcctcaaaa
agcatgcagatctcaactctgaagacagagttcctacccctcctgagtgtgtccttcatc
tcagagaacagtgtcctggctgctggccatgactgctgccccatgctctttaactacaac
gaccgcggctgcttgacctttgtctccaagctagacatcccgaaacagagcatccggtgc
aacatgtcgaccatggagcacttccgcaacatggacaagcgggccacgaccgaggaccac
aacccggccctggagacactgcaccagaacactatcactcaagtgtctatttatgaggtg
gacaagcaagattgtcgcaaattttgcactactggcatcgatggagccatgaccatttgg
gatttcaagaccttagagtcttctatccagggccttcagataatgtgcagctga
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