Physeter macrocephalus (sperm whale): 102986545
Help
Entry
102986545 CDS
T06011
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04110
Cell cycle
pcad04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102986545 (SMC1B)
04114 Oocyte meiosis
102986545 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102986545 (SMC1B)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102986545 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
102986545 (SMC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
AAA_33
ATG16
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
102986545
NCBI-ProteinID:
XP_007128820
Ensembl:
ENSPCTG00005001126
UniProt:
A0A2Y9FQU7
LinkDB
All DBs
Position
6:complement(48236188..48327046)
Genome browser
AA seq
1231 aa
AA seq
DB search
MGRLELLLVENFKSWRGLQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKN
IQELIHGAHIGKPVSSSASVKIVYMEESGEEKTFARTIRGGCSEYFFGDSPVSRSVYITE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSAELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKINKIQLQLFQLYHNEKKISFLNS
ELERVNKDLSVTKESLSRHENVVKAKKKEHGMLSRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVAKKSIKDNEKQCSKQEDDIKALETELVDLDGAWRSFEKQIEEEILR
KGRDIELEASQLDQYKELKEQVRKKVGIMTQQLKKLQWEQKADEERLALEKRRHGEAQEN
LKQIKEQIEDHKKRIEKLEEYTKTCINCLKEKKQQEETLVDEIEKTKSRMSEVNEELNLI
RSELQNAGIDTHEGKRQQKRAEVLEHLKRLYPDSVFGRLFDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIQFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFNGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKELKNLRDRRTQLIQELKDLMKTLRKEADLKQIQTLIQGTHTRLKYSQSELE
MIKKKHLAAFYQEQSQLQSELLNIESQCTMLSEGIKERQRRIEEFEGRIHKVEDDIFQHF
CEEIGVENIREFENKHVKQQQEIDQKRLEFEKQNTLLNVQLEYSRNQLKKKLNKINTLKE
TIQKGREDIDNLKKAEENCLKIVDELMEKRQQLKDIFVTQNTNTEKVQAQIEEERKKFLA
VDREVGKWQKKVVILQTSLEQKRLEKHNLLLNCKVQDIEIILLLGSLDDIIEVELGPEAE
STQATMDIYEKEEAIEVDYSSLREDLKALQSDEEVEAHLRLLRQQVASQEDVLLRTAAPN
LRAPENLKTVRDKFQESTDAFEASRKEARICRQEFEQVKKRRYDLFSQCFEHISIAIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEELYSKADALIGIY
PEHDDCMFSRVLTLDLSQYPDTEDRKQQEAR
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtttggagctgctgcttgtggagaacttcaagtcgtggcggggcctccaggtc
ataggccccttcagaaggttcacctgcatcattggccccaacggctccggaaaatctaat
gtaatggatgcgcttagttttgtaatgggagaaaaaatagctaatttaagagtgaaaaat
attcaagaacttattcatggagcacatattggaaaacctgtttcttcttctgcaagtgta
aaaattgtatacatggaagaaagtggagaagagaaaacatttgcaaggactatccgaggg
ggatgctcagaatatttttttggtgatagtcctgtgagtcgttctgtttatatcacagag
ttagaaaagataggcataatagtcaaagcacggaactgtctagtttttcagggaactgtg
gagtcaatttcaatgaaaaaacccaaagaaagaacgcagttttttgaggaaatcagcact
tcagcagagcttataggagaatatgaggaaaagaaaagaaagttacagaaagccgaagaa
gatgcacagtttaattttaataagaaaaaaaatgtagctgcagagcgtaaacatgcaaag
ttagagaaggaagaggcagaacgttaccagagtctccttgaagaactgaaaataaacaag
atacaactgcagcttttccaactgtatcacaatgagaaaaaaatttcttttctaaacagt
gagttagagcgtgtgaataaggatttgagtgtcacaaaagagtctctttctcgtcatgaa
aacgtagttaaagccaagaaaaaggaacatggaatgttaagcagacaactgcaacaaaca
gaaaaagaattaaaatctcttgaagcacttctaaatcagaagaggcctcaatatattaaa
gctaaagaaaacacttctcaccacctcaagaagttagatgtggctaagaaatcaataaag
gacaatgaaaaacaatgttctaaacaggaagatgacataaaggccttagagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcagattgaggaagaaattttacgt
aaagggcgagacattgaactagaagccagtcagctggatcaatacaaagaacttaaggaa
caagtaagaaagaaagtgggtataatgacccaacaattgaaaaagctgcagtgggagcaa
aaggctgatgaagaaagactggcacttgaaaagaggaggcatggggaagctcaggaaaat
ctaaaacaaataaaagaacaaatagaagatcataaaaagcgaatagagaagttggaggag
tatacaaaaacatgcatcaattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
gatgaaattgaaaaaacaaaatcaagaatgtctgaagttaatgaagagctgaatcttatt
agaagtgaactgcagaatgctggaattgatacccatgagggaaaacgtcagcaaaagaga
gcagaggttctggaacaccttaaaagactttacccagattctgtgtttggaagactgttt
gacctgtgtcatcctatccataagaaataccagctggctgttactaaactttttggtcgg
tacatggttgccattgttgtagcctctgaaaaagtagcaaaagattgtattcaatttctg
aaggaggaaagagctgaacctgagacattccttgctttagattaccttgatatcaaaccg
atcaatgaaagattacgggagattaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actgtggaagaagcaaggcatattgccttcaatggacctgaaagacggaaaacagtagct
cttgatggaacgttatttttaaaatctggagtcatctctggagggtcaagtgacttaaaa
tacaaggctagatgctgggatgagaaggaattaaagaatttaagagacaggagaacccaa
ctaatccaagaattaaaggatttaatgaagacacttcgcaaggaagcagatttgaaacaa
atacagactctaatacaaggaactcatacacgactcaaatattcgcaaagtgaactagaa
atgattaaaaagaagcaccttgctgctttttaccaggaacaatctcagctacaaagtgaa
ctactaaatattgagtctcaatgtactatgttgagtgaaggaatcaaagaacggcaacga
agaattgaggaatttgaaggaaggatacataaggttgaagatgatatttttcaacacttc
tgtgaagaaattggtgtagaaaatattcgtgaatttgagaacaaacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgagaaacaaaatactctgcttaatgttcaa
cttgaatatagtcgcaatcagctgaagaaaaaactgaataagattaacacattaaaagaa
actatccagaaaggtagagaagacatcgataacctaaagaaggctgaagaaaattgtctg
aaaattgtggatgaactcatggagaaacgacagcaacttaaggacatatttgtcactcag
aataccaacactgagaaagtccaagctcaaattgaagaggaacggaagaagtttttggct
gttgatagggaagtgggaaaatggcaaaaaaaagttgtaatccttcaaacttctctggaa
cagaagcggttagagaaacataacttgttgcttaattgcaaagttcaagacattgaaata
attcttttgttggggtcattggatgacatcattgaagtggagttgggacctgaagcagaa
agtacccaggcaacaatggatatatatgaaaaagaagaagccattgaggtagactacagc
tctctacgagaggatttgaaggctctacaatctgatgaagaagttgaggcccaccttaga
ctcctacggcaacaagtagcatcccaggaagatgtcctgctgaggacagcagccccaaac
ctcagagccccggagaacctaaagactgtcagagacaagtttcaggagtccacagatgct
tttgaggccagcagaaaggaagccagaatatgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgatcttttcagccagtgttttgagcacatctcaatcgcaattgatcagatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagaaaacccagaa
gagccttacttggagggaattagctataactgtgtggctccaggcaaacggttcatgcca
atggataatttgtctgggggagaaaagtgtgtggcagctttggctctcctgtttgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaat
actaacattggcaaagtatccagttatatcaaagagcagactcaggaacagtttcagatg
ataatcatttccctaaaagaggagttatattccaaagctgatgcactgataggcatctat
ccagagcatgatgactgcatgttcagccgagttttgaccctagatctgtctcagtatcca
gatactgaagacagaaagcagcaggaggcccgttag
DBGET
integrated database retrieval system
