Physeter catodon (sperm whale): 102986802
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Entry
102986802 CDS
T06011
Name
(RefSeq) nuclear RNA export factor 3-like
KO
K14284
nuclear RNA export factor
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03008
Ribosome biogenesis in eukaryotes
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
pcad05014
Amyotrophic lateral sclerosis
pcad05164
Influenza A
pcad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102986802
03015 mRNA surveillance pathway
102986802
03008 Ribosome biogenesis in eukaryotes
102986802
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102986802
05168 Herpes simplex virus 1 infection
102986802
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102986802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102986802
03009 Ribosome biogenesis [BR:
pcad03009
]
102986802
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102986802
mRNA cycle factors
Stress granule specific factors
102986802
Ribosome biogenesis [BR:
pcad03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
102986802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tap-RNA_bind
NXF_NTF2
NTF2
Motif
Other DBs
NCBI-GeneID:
102986802
NCBI-ProteinID:
XP_054937571
UniProt:
A0A9W2WE89
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All DBs
Position
21:complement(79176453..79186190)
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AA seq
452 aa
AA seq
DB search
SNFDLTVYLCEYNKQVTSLQRRARCRHIYQRRYNNWSEEVRSGIHPSSQQQQDGDQATSD
VHKDTGVRYAPYAIPFCHRRGNFQKKDETHVNKATEQKPPERKMERNRQDETLGSWFKIR
IPFGIKYDEKWLLNLIQKQCSVPFTPVEFHYEKMQAQFFIENANIAFALKNVNGVIYNEA
NERISIFVEPCDAPHSVLKELKSEKVEQIKLPVKERYDVSQQSLDIQRVRSDPGWDTGVW
VYLSWLCFSGPCGSSSSSQVKSAGEMDKGERLEPEGMCADRNPLCTTFPDKSTNISSILE
LFPKLLTLKLKDPHLRVQLLKHTKRVILHTLCVLPKTQHDFSSFVVDTWFQTETMLCFSV
SGVFKEVEGSSQGCVRAFTRTFIAIPASSSSLCIVNDELFVSDSNPKKTESVFLIPKPTC
CASSISTLSMEWQAMVQAFSTWSGMNVQDSQK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
tcaaattttgacttgacagtttatctgtgtgagtacaataagcaagttacctccttacaa
agaagagcaagatgccggcatatttaccaaaggaggtataacaattggtctgaagaagtc
aggtctggtattcatccttcatcccagcaacaacaagatggagatcaagcaacaagtgat
gttcacaaggacaccggagtaagatatgctccctatgccattccattctgccatcggaga
ggcaattttcagaaaaaagacgaaacccatgttaacaaggcgacagagcaaaagcctcca
gagagaaaaatggagagaaacaggcaggatgagaccttggggagctggttcaagatcagg
atccccttcggtattaaatatgatgagaagtggctgctgaatttgattcagaagcaatgc
agtgtccccttcaccccagtcgaatttcactatgagaaaatgcaggcccagttcttcatt
gagaacgccaacattgccttcgcactgaagaatgtcaacggcgtgatttacaatgaggct
aatgaaaggatatctatctttgttgagccctgtgatgcaccccactctgtgctgaaggag
ctgaagtcagaaaaggtggagcagataaagctgcccgtgaaggaacgatatgatgtctcc
cagcaatctcttgacatccagagagtccgctctgaccccggctgggacactggggtgtgg
gtgtacttgtcctggctctgtttctctggcccatgtggttcctcctcatcatcacaggtg
aagtctgcaggggagatggacaagggtgagcggctggagccagaagggatgtgtgcagac
agaaaccccctgtgcaccaccttccctgataagtcaaccaacataagctccatcctggaa
ttgttccccaagttactaaccttgaagctcaaggacccccacctgcgggtccagctgctg
aagcacacaaaacgtgtcattttgcacaccctctgtgtgttgcccaagactcagcatgac
ttcagctccttcgtggtggacacgtggttccagacggaaacgatgctctgcttctccgtc
agtggggtgttcaaggaagtggaagggagttctcagggctgtgtgcgtgccttcacccgg
accttcatcgctatccccgccagctcttccagtctttgcatcgtgaatgacgagctgttt
gtgagtgactccaaccccaagaagactgagtctgtgttcctcatcccaaagcctacatgc
tgtgctagctccatttccaccctctccatggagtggcaggcaatggtgcaggctttctcc
acctggtctgggatgaacgtccaggattctcagaagtga
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