Physeter macrocephalus (sperm whale): 102986996
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Entry
102986996 CDS
T06011
Symbol
VPS4B
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03250
Viral life cycle - HIV-1
pcad03272
Virion - Hepatitis viruses
pcad04144
Endocytosis
pcad04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102986996 (VPS4B)
03272 Virion - Hepatitis viruses
102986996 (VPS4B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102986996 (VPS4B)
09143 Cell growth and death
04217 Necroptosis
102986996 (VPS4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102986996 (VPS4B)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102986996 (VPS4B)
Membrane trafficking [BR:
pcad04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
102986996 (VPS4B)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
Check point factors
Other check point factors
102986996 (VPS4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
IstB_IS21
AAA_16
AAA_5
AAA_14
TIP49
AAA_22
RuvB_N
AAA_25
AAA_18
AAA_2
nSTAND3
DUF815
ABC_tran
AAA_33
RNA_helicase
PhoH
AAA_24
AAA_17
AAA_7
NPHP3_N
AAA_28
Mg_chelatase
NACHT
Parvo_NS1
TPR_1
DUF5113
bpMoxR
MCM
TPR_11
Motif
Other DBs
NCBI-GeneID:
102986996
NCBI-ProteinID:
XP_007105172
Ensembl:
ENSPCTG00005009408
UniProt:
A0A2Y9ENN3
LinkDB
All DBs
Position
19:complement(75771027..75801697)
Genome browser
AA seq
443 aa
AA seq
DB search
MASTSTNLQKAIDLASKASQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCTEYLDRAEKLKEHLKKEKKLQKPVKEGQPSPAGEKGNDSDGEGESDDPEKKKLQSQLQ
GAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKS
YLAKAVATEANNSTFFSISSSDLVSKWLGESEKQVKYLFQLARENKPSIIFIDEIDSLCG
SRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLP
EAHARAAMFKLHLGTTQNSLTEADVRELGKKTEGYSGADISIIVRDALMQPVRKVQSATH
FKKVRGPSQADPNNIVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVCMSDMLRSLSST
KPTVNEHDLLKLKKFTEDFGQEG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacctcgaccaacctccagaaagcgatagatcttgctagcaaagcatcccag
gaagacaaagctgggaactacgaggaagcccttcaactctaccaacacgctgtacagtat
tttctccatgtagttaaatatgaagcacagggcgataaagccaagcaaagtatcagggca
aagtgtacagagtatcttgatagagcagaaaaactgaaggagcacctgaagaaggagaaa
aaactgcagaagccagtgaaggagggacagccaagtccagctggtgagaaggggaatgac
agtgatggggaaggagaatctgatgatcctgaaaaaaagaaactacagagtcaacttcaa
ggcgccattgttatagagcgaccaaatgtgaaatggagcgatgttgccggtctcgaagga
gccaaagaagcactgaaagaggctgtgatattgcctattaaatttcctcatctctttacg
ggcaagagaacaccttggaggggaatcctgttatttgggccacctggaacaggaaaatcc
tatttagccaaagctgtagcaacagaagcaaacaactcaacatttttctcaatatcttcc
tctgaccttgtttctaagtggctaggtgaaagtgaaaagcaagttaagtacttattccaa
cttgccagagagaataaaccttccattatcttcattgatgaaattgattctctgtgtggt
tcaagaagtgaaaatgaaagtgaagctgcacgtagaattaagacagagttcctagttcaa
atgcaaggggttggtgtggacaacgatggaattttggttctgggagctacaaatataccc
tgggttctggattctgccattaggcgaagatttgagaaacgaatttatattcctttgcct
gaggcccatgcccgagcagcaatgtttaaactgcacttggggaccactcagaacagtcta
acagaagcagatgtccgggaacttgggaagaaaactgaaggctattcaggggcagacata
agtatcattgtacgtgatgcacttatgcagccagttaggaaagtacagtcagctactcat
tttaaaaaggttcgcggaccttcacaagctgatcctaacaacatagtagacgatctgcta
acgccttgttctccaggtgatcctggtgccattgagatgacgtggatggatgtccctggg
gataaacttttggagccagttgtttgcatgtcggatatgttacggtcactatctagcaca
aagcccacagtcaatgaacacgacctgttgaaattaaagaagtttacagaagattttggc
caagaaggctag
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