Physeter macrocephalus (sperm whale): 102987021
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Entry
102987021 CDS
T06011
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102987021 (RC3H2)
04121 Ubiquitin system [BR:
pcad04121
]
102987021 (RC3H2)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102987021 (RC3H2)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102987021 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102987021
NCBI-ProteinID:
XP_007128970
Ensembl:
ENSPCTG00005014694
UniProt:
A0A2Y9FR88
LinkDB
All DBs
Position
9:3955433..4003208
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAIRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETSGKIVPSTNGISNAENTVSQLIPRSTDSTLRALETVKKVGKVGTNGQSAAGPSAE
SVTENKIGSPPKTPVSNIVATSAGPTNVGTELNSVPPKSSPFVTRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGENDYTEDAADTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPLATSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgatcagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcaatcggtaaagttaagtaatttaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtaagagccatacgagcagcccgttcacttggagaa
agaactgtaacggaactaatattacagcaccagaaccctcagcaattgtctgccaactta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctggcattagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttccctgatgcagctaaaggaggaatttcggagttatgaggctttacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcagtgg
tcttcacttctatatggtgacttggcgcataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgttcaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatataagactagcatgtgccgagatttgcga
cagcaaggagggtgtccacgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacatcggggaaaattgttccaagtacaaacggaatttcaaatgcagaa
aacactgtttcccagctaattccacgtagtactgacagtacattaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagagtgctgctgggccttctgcagag
tctgtaactgaaaataaaattggttctccacccaagactcctgtaagtaatatagtggct
acctcagctgggcccactaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttgtaactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccgaggactcagataccctttgaagtcccacagtacccacagacaggatactaccca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccatgccatatgctgatcattacagtaca
ttttcgcctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtgtatcagacgtctttgcgggaaagatataactcattagat
gggtattattcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gaaagtgtgagtggcacaaaatttgaagaagatcatctttcccattattccccctggtct
tgtggcaccataggttcctgtataaatgctatcgattcagagcccagagatgtaattgct
aattcaaatgctgtgttaatggacctggacagtggagatgttaagagaagagtgcattta
tttgaaactcagagaaggacaaaagaagaagatccaataattccttttagtgatggacct
atcatctcaaaatggggtgcaatttctagatcttcccgtacaggttaccataccacggat
cctgtccaggccactgcttcccaaggaagtgcgactaaacctatcagtgtatcagattat
gtcccttatgtcaatgctgttgattcaagatggagttcatatggtaatgaagctacgtca
tcagcacattatattgaacgggacagattcattgttactgatttatctggtcatagaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcgttg
cttcttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttaccttaaatcttctaagcaaggaaattgaactgagaaatggagagaat
gattatacagaagatgcagctgatactaagcctgatagggatatagagttagagctttca
gcacttgatactgatgaacctgatggacaaggtgaacagattgaagagatcctggacata
cagcttggtatcagttctcaaaatgatcagttactgaatggaacagcagtagaaaatggg
catccagtccagcaacaccaaaaggagcccctggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagtcag
ccactcccagtgtccattagcaatgcgagttgcctccctcttgccacatctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttgaaacct
gttgcaaatgggaagatggttaacagctga
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integrated database retrieval system
