Physeter macrocephalus (sperm whale): 102987027
Help
Entry
102987027 CDS
T06011
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102987027 (CHD9)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102987027 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
102987027
NCBI-ProteinID:
XP_023980676
Ensembl:
ENSPCTG00005011428
UniProt:
A0A2Y9SPT2
LinkDB
All DBs
Position
17:25330083..25576282
Genome browser
AA seq
2933 aa
AA seq
DB search
MTFGNDPIISTTEKLNILRLESTAQFVIEFFKMTDPMMDFFDDANLFGETLEGLSDDAFV
QPGPVSLVDELNLGAEFEPLHIDSLNHVQGTPTHQKMTDYEQLNQFDSMKFHQVNQSFGS
PAEHVLSPHSQFNCSPIHPQNQPNGLFPDVADGSPMWGHQTATSISSQNGSPFHQQGHSH
SMHQTKSFVAHHDFALFQANEQQTQCTSLRSQQNRNNLNPGQNSLSQSKNFMDVNVSGPH
RVSVNHPSQINNASTSQQSLSMQQFSQTSNPSVHFLKCSNHQEGNFNGPSPNMTSCSVSN
SQQFSSHYSFSSNHVSPNGLLQSSAVLAPNHTNQTLSDFTGSNSFSPHRGIKQESTQHML
NPNTSLHSNNFQMLHSSHPQGNYSNSKLSPVHMNFPDPVDSGTQMGHFNDHVETNGFSSL
EENLLHQVESQTEPFTGLDPEDLLQEGLLPQFDESAFGHDNSSHILDHDLDRQFTSHLVT
RPSDMAQTQLHTQARSWHSSLSNHQHLHDRNRLCLQRQPPSSKKSDGPGTYTKLQNTQVK
IMSEKKQRKKVDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSASVEGKEEKK
GRRMKSKPKDKESKKTKTCSKLKEKTKIGKLIITLGKKQKRKNESSDEISDAEQVPQHAF
KEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEVKGSIKIKKHSAPLPGEQPLQLFVENPSE
EDAAIVDKILSSRIIKKEISPGVMIDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKI
KRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSFCEDKDTGEPVIYYLVKWCSLPYE
DSTWELKEDVDLAKIEEFEQLQASRPDTRRLDRPPSNIWKKIDQSRDYKNGNQLREYQLE
GLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWERE
FRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITTFEMILGGCGEL
NAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPL
RFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQ
KKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFRDTYN
PAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYE
RIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDL
QAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRASLKLGLDKAVLQSMSGRENNVGGIQQ
LSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDIDQILLRRTKTITIESEGRGSTFAKASF
VASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAE
LSEAESEGDEKPKLRRPCERSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEH
DVEIICRALLAYCLVHYRGDEKIKGFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKK
VKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEC
QKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDADKSLLIGVFKHGYEKYNTIRADPALCF
LERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPAIFKDDIEDDVSSPGDLVIADGDGQ
LMEGDKIYWPTQSALTTRLRRLITAYQRTNKNRQIQQIQPTFSVPASVMQPLYEEATLNP
KMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGQFDWTKFRAMARLHKKTDDSLEKY
LYAFMSMCRRVCRLPSKDELVDPNIFIQPITEERASRTLYRIELLRKVREQALRHPQLFE
RLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQSKM
AHSRTSTPLLQQYQVALSASPLTSLPRLLDPKGIILEDVKVKSENLKEEPQFSEEESMTS
EETRTLIKSEPVSPKNGVLPQATGDQKSGGKGETDRRMVAARTEPLTPNPASKKQRVHKR
GSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSS
SSSSSSSEESDSEEEEVQKRAEGTPHVKAYDEESVASLSTTQDETQDSFQMNNGTPESAY
ILQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDANAVASFYTTKLLDSSG
AATEYSEPSVPTPAGAGVKEEHDQSTQMSKVKKHVREKEFTVKIKDEGGLKLTFQKQGLA
QRRPLDSEDGTLGQQQYLTRLRDLQGASETSLASFPKSMPVSGTPIQSTLGANGVLLDNQ
PVVKKRRGRRKNVEGVDILFFNRNKPPNHVTLGLNTSQISTGINPALSYTQPQGIPDTES
PVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPRMQLHEGRPKQKRHRCR
NPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENTEYGVAPEWGDVVKQ
SGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKATAAAAAATATSISGNPLLANGLLP
GVDLTTLQALQQNLQNLQSLQVTAGLMGMPASLSSGGEAKNVAAMFPMLLSGMTGLPNLL
GMGGLLTKPTESGAEEKKGNDSKELEGKKERTESQNSENGGEDSVSSSPSTSSTAALSAA
AAASPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNTFDVQKNKNSDLGSSKSVEVKE
EDSRVRDQEDKGGTEPSPLNENSTDEGSEKADASSGSDSTPSSSEDSDSSNED
NT seq
8802 nt
NT seq
+upstream
nt +downstream
nt
atgacctttggaaatgatccaataatatctactacagagaagctgaatatactccgtttg
gagtcaacagcccagtttgttattgaatttttcaagatgacagatccaatgatggacttt
tttgatgatgccaatctgtttggtgagaccttagaaggtttgtcagatgatgcatttgta
caaccaggacctgtttcactagttgatgaattgaacttgggtgcagaatttgaacctttg
cacatagactcactgaaccatgttcaaggtactccaacacatcagaagatgactgattat
gaacagttaaatcagtttgattcaatgaaatttcaccaagttaatcagtcttttggtagc
ccagctgaacatgtgttatctccacactctcagtttaattgttctccgatccaccctcag
aaccagcccaatggtttgtttccagatgtagcagatggcagtccaatgtggggccatcag
acagctactagcatttcaagtcaaaatgggtctccttttcaccaacagggacattctcac
tctatgcatcaaactaaaagctttgtggcacaccatgactttgccttatttcaggccaat
gaacaacaaacacagtgcacttcgctacgctcacaacaaaacagaaataatcttaaccca
gggcaaaattctcttagccagtctaaaaattttatggatgttaatgtttctggtccacac
agagtcagtgttaaccatccatcacaaattaataatgcatctacttcacaacagtccctt
tcgatgcagcaattttctcaaacgtcaaatccttcagtacacttcctgaagtgtagcaat
catcaagaaggaaattttaatggaccttctccaaatatgacttcttgttctgtcagtaat
tcacagcagttttcttcacattattccttttccagtaatcatgtgtcaccaaatggtctt
cttcagtcctctgcagttcttgcacctaatcatacaaatcagactttatctgattttact
gggagtaattccttttcacctcataggggaatcaagcaagaatcgactcagcatatgcta
aatcccaatacatcgctgcattcaaataacttccaaatgttgcattcatcacatcctcag
ggtaattacagcaattcaaaattatctcctgttcacatgaacttcccggatcctgttgac
tcaggaactcaaatgggccatttcaatgatcatgtagaaactaatggcttttcatcttta
gaagagaatttacttcatcaagtggaatctcaaactgagccgttcacaggacttgaccca
gaagacctccttcaggagggtctccttccccaatttgatgagtcagcatttgggcacgat
aattcaagtcatattttagatcatgaccttgatcggcaatttacttcacatcttgtaaca
cggccttctgatatggctcaaactcagttgcatactcaggctcggagttggcattcatca
ctttctaatcatcagcatttacatgacagaaatcgcctatgtttacagcgacagcctcca
tcttccaagaagagtgatggtcctgggacatatactaagttgcagaatacccaggtgaag
atcatgtccgagaagaagcagagaaaaaaggtggactcagaaagcaagcaagaaaaggct
aatcgtataatatcagaggccatagcaaaagcaaaggagcgtggggaacgcaatattcca
cgagtaatgagccctgaaaactttcctagtgcttcagttgaaggaaaagaggaaaagaaa
ggtagaaggatgaaatctaaaccaaaggacaaagagagcaaaaaaacaaaaacttgttct
aagttaaaagagaagacaaaaattggcaaacttattattacattgggtaagaaacaaaaa
agaaagaatgagtcttcagatgaaatatctgatgcagagcaggtgccacagcatgcattc
aaagaggaagactctcaaaaaagaagatcaaatcgacaaattaaaagaaaaaaatatgca
gaagatgcagaagggaaacaatctgaagaagaggttaaaggctctataaaaataaaaaag
cattcagctcctttacctggtgaacagcctttacagttatttgtggagaatccgagtgaa
gaagatgctgcaattgtggacaaaatactgtcttctagaattataaaaaaggaaatatca
cctggagtgatgattgatacagaagaattttttgtaaaatacaagaattactcctatctt
cactgtgagtgggccacagaacagcagcttctgaaagataaaaggatccagcagaaaatc
aaacgattcaaattgagacaagcacaaagagcacatttttttgcagatatggaagaagaa
ccatttaacccagactacgttgaagtagacagagtattagaagtctctttttgtgaagat
aaagatactggtgagcctgttatttactacttagtaaagtggtgctcattaccatatgaa
gatagtacttgggaactaaaagaagatgtagatcttgcaaaaatagaagagtttgaacag
ttgcaagcttcacggcctgacacaagacgtttggaccgtcctccttctaatatttggaaa
aaaatagatcaatccagggattataaaaatggcaatcaactcagggaatatcaactggaa
ggactcaactggctcttattcaactggtacaatagacgaaactgcattttagcagatgaa
atgggtcttggcaaaaccattcaatcaattacattcctctacgaaatccttctgactggt
ataagaggacctttcctgattattgctccactttctactattgcaaactgggagagagaa
tttcgtacatggactgatattaatgttgtggtttatcatgggagcctgattagcagacag
atgatacagcaatatgagatgtacttcagggactcacagggacgaatcattcgaggagct
tacagattccaagccatcatcaccacttttgaaatgattcttggaggctgtggagagctt
aatgcaattgaatggcgatgtgtgattattgatgaagcacataggttaaaaaataaaaat
tgtaaacttctagaaggtctgaaactcatgaatctggagcacaaggtgcttttgactggc
acacctctccaaaatacagttgaagaactattcagtcttcttcactttctggaaccctta
aggtttccttctgaatcaacgttcatgcaagaatttggggatctgaaaacagaggaacag
gtgcagaaacttcaggctatcttgaaaccaatgatgttgagacgattgaaagaagacgtg
gaaaagaagttggcacctaaggaagaaaccatcattgaagtggaacttactaacattcag
aagaaatactaccgggctattctggagaagaacttttcgtttttatccaaaggagcaggg
cagactaatgtacccaacttggtcaataccatgatggagctcaggaagtgctgtaatcac
ccatatcttatcaaaggtgctgaggagaaaatacttggagaatttagagatacatataat
ccagctgcttctgattttcatcttcaagcaatgatccagtctgctggtaaattggtcctt
attgataaattgcttcctaaaatgaaagcaggaggtcataaagtgctcatcttctctcag
atggtacgctgccttgatatcctggaggactatcttatacataaaagatatttatatgag
cgaattgatggaagagtcagagggaatcttcgacaagctgctatagatcgatttagtaaa
cctgattcagatcgatttgtctttcttctttgtacccgagctggtgggttgggcatcaac
ttaactgcagctgatacatgtataatttttgattctgattggaatcctcaaaacgacctt
caggcccaagctcgttgccacagaatcggtcagaataaagcagttaaagtctaccgacta
gtaactcgtaactcatatgaaagagagatgtttgaccgagccagtctgaaactgggtcta
gataaggctgtattacagagcatgagtggaagagaaaataatgttggtggtattcagcag
ctttccaaaaaggaaatagaagatctgcttcgaagaggtgcttatggtgccattatggaa
gaagaagatgaaggctctaaattctgtgaagaagatattgatcagattttactacgtcgt
acaaaaaccattacaattgaatcagaaggacgtgggtcaacatttgccaaggcaagtttt
gtggcatctggaaaccgaacagatatttccttagatgatcccaacttttggcaaaaatgg
gcgaaaaaggcagaaatagatatagatgccatcagtggtagaaacagcttggttattgac
actccaagaattaggaagcaaacaagacccttcagtgccacaaaagatgaattggctgaa
ttatctgaagctgaaagtgaaggagatgaaaagcccaaactccggagaccctgtgagcgt
tcgaatggctatggaagaactgaatgctttagagtagagaaaaatctgctagtttatggg
tggggccgatggagagagattctgtctcatggccgttttaaaaggcagctaaatgagcac
gatgtggaaataatttgccgagccctcttagcttattgccttgttcactaccgaggagat
gagaaaattaaaggctttatatgggatctcattactccaactgaagatgggcagacacga
gagctacaaaatcatctaggcctgtcagcccctgtacccagaggtcgaaaagggaagaaa
gtaaagactcaaacaagctcatttgatatacaaaaagcagaatggcttcgaaaatacaat
cctgagcagctacttcaagatgaaggctacaaaaaacatataaaacaccactgtaataaa
gttttgcttcgtgtaagaatgctgtattatctaaagcaagaagtcattggaaatgagtgt
cagaaagtgtttgacggagttgatgcaagtgacattgatgtttgggtcccagaaccagac
cactcagaagttcctgctgaatggtgggattttgatgctgataagtcacttcttattgga
gtttttaaacatggttatgaaaaatataacactatccgagcagacccggcattatgcttc
ttggaaagagtgggaaaacctgatgagaaagcagttgctgcagaacagagggcgaacgat
tatatggatggggatgtggaagatccagaatacaaacctgccccagctatctttaaagat
gatatagaggatgatgtttcctcaccaggagatcttgttatagcagatggagatggtcaa
ctgatggagggtgataaaatttattggcctactcagtcagctttaaccacacgtttgagg
cgtctcatcactgcatatcagcgtactaataaaaacagacaaatccagcagatacaacct
actttctcagtgcctgccagtgttatgcagcctctttatgaagaagccactcttaatcct
aaaatggcagccaagatagaaagacagcagagatggacaagaagagaagaagctgacttt
tatagagttgtatctacatttggagtggtgtttgatcctgacagaggccaatttgattgg
acaaaatttagagctatggctaggctacataagaaaactgatgatagtttggagaaatat
ttgtatgcattcatgtctatgtgtcggagggtttgtcgtcttccttccaaagacgaattg
gtggatccaaatatttttatccagccaatcacagaagaacgtgcttctaggactttatat
cgcattgaactgctaaggaaagtaagggaacaggccctccgacatccacagttgtttgag
cgcttgaagctttgccatccaaatccagacttaccagtctggtgggagtgtggccctcat
gatagggacttgctcattggagctgctaaacacggggtgagccgaacagactatcacatt
cttcgtgatcctgaactctcatttatggcagctcaaaggaactacagtcaaagtaagatg
gctcattcaaggacttctaccccacttttacagcaatatcaagtagcactttctgcttct
cctcttacctctctacctaggctcctagatcctaaaggtattattctagaggatgtgaaa
gttaaaagtgaaaaccttaaagaggagcctcagttttctgaagaagaatctatgacttct
gaggaaaccaggacactaataaagtctgagcctgtaagtccaaagaatggtgttttacca
caggctactggagaccagaaatctggtggaaaaggtgaaacagacagacgcatggttgca
gccagaacagagcctctaactccaaacccagcttctaagaagcagcgagtccacaaaaga
ggatcagagtctagttctgattctgactctgattctgagagatcgtcctgttcttccaga
tcatcttcttcctcatcttcctcttcttcttgttcccactctcgatcaggctctagctct
tcttcttcctcctcttgttcttcagcatcatcttcatcctcatcctcgtcctcctcttcc
tcatcatcctcatcttcatcagaagaaagtgacagtgaagaagaggaagtccaaaagcga
gcagaaggtacccctcacgtgaaagcctatgatgaagaaagcgtcgcatcactgagcact
acccaggatgagacccaggatagtttccagatgaacaatgggaccccagagtctgcttac
atcctacaaggtggatacatgctggcagcttcgtactggccaaaggaccgtgtgatgatc
aaccgattggacagtatttgtcaaacagtcctgaaagggaagtggccttcagctagaaga
agttatgatgccaatgcagtggcttctttctataccacaaagctgctggacagctctggc
gcagctacagaatatagcgagcccagcgtgcccactcctgcaggtgctggcgttaaagaa
gaacacgatcagtcaacacagatgtcaaaggtgaagaagcatgtacgagaaaaggagttt
acagtgaaaatcaaagacgaaggtggtttgaagttgacatttcagaagcaagggcttgct
cagagaaggccgttggacagtgaagatggtactctagggcagcagcagtacctcactcga
cttcgggaccttcaaggtgcgtcagagaccagcctcgccagttttccaaaatccatgcca
gtatcaggtactcccattcagtcaacccttggtgccaatggagttttattagacaaccag
cctgtagtcaaaaaaaggcgggggaggaggaagaatgtagaaggtgttgacatcctcttt
ttcaacagaaataaaccacctaatcatgttactttaggcttaaacacctcacagatttct
acagggataaatccagcactatcctatactcaacctcaaggaattcctgatacagaaagt
cccgttccagttattaatcttaaagatgggacaaggcttgcaggcgatgatgcaccgaag
agaaaggatttggaaaaatggcttaaggagcacccaggttatgtggaagatttaggagct
tttattcctagaatgcagctccatgaggggagacccaagcaaaaaaggcatcgttgcaga
aaccccaataaactagatgtgaatagtctcactggagaagaacgtgttcagctgattaac
agaagaaatgccagaaaggttggaggtgcctttgctccccctctgaaagatttatgtcgg
ttcctgaaagaaaatacagaatatggagtagctcctgaatggggagatgttgttaagcag
tctggatttcttccagaaagtatgtatgaacgtattctcactggtcccgttgtgagagag
gaagtaagcaggcgagggagacggcctaaaagtggaattgcaaaggccactgcggcagca
gcagctgcaactgccaccagtatttcaggcaatcctttactagccaatggattacttcca
ggtgtggacctcacaactcttcaggccttacaacaaaacctacaaaacttgcagtcgctg
caagtaaccgcagggctgatgggaatgcctgctagcctttcttctggaggagaagctaaa
aacgtggctgccatgttccccatgctgctgtcaggaatgactggattgccaaatctgttg
ggcatgggagggctcctgacaaagcctacagaatctggagcagaagaaaaaaagggaaat
gactctaaggagctagaaggaaaaaaagaaaggacagagagccaaaattcagagaatggt
ggtgaagactctgtgtcaagttctccttcaacatcctctactgctgcattaagtgcagct
gcagctgccagcccgttagctcttaacccactattactatctaatatactttatccaggg
atgcttctcactccaggccttaatcttcatattccaactttgtcccagtccaatactttt
gatgtacagaaaaataaaaacagtgacttaggctcatctaagtctgtagaagtaaaggaa
gaagattccagagttagagatcaggaagacaaagggggaactgaaccgagtcctctcaat
gaaaacagcacagatgagggttcagagaaagccgatgcttcatctggatctgatagtaca
ccatcgtcatccgaggattcagattctagtaatgaagactga
DBGET
integrated database retrieval system
