KEGG   Physeter macrocephalus (sperm whale): 102987203
Entry
102987203         CDS       T06011                                 
Symbol
OPTN
Name
(RefSeq) optineurin isoform X3
  KO
K19946  optineurin
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad04137  Mitophagy - animal
pcad04140  Autophagy - animal
pcad05014  Amyotrophic lateral sclerosis
pcad05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102987203 (OPTN)
   04137 Mitophagy - animal
    102987203 (OPTN)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102987203 (OPTN)
   05022 Pathways of neurodegeneration - multiple diseases
    102987203 (OPTN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcad04131]
    102987203 (OPTN)
Membrane trafficking [BR:pcad04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    102987203 (OPTN)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    102987203 (OPTN)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    102987203 (OPTN)
  Xenophagy
   Cargo receptors
    102987203 (OPTN)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 CMD
Other DBs
NCBI-GeneID: 102987203
NCBI-ProteinID: XP_007126098
Ensembl: ENSPCTG00005011312
UniProt: A0A2Y9FLQ9
LinkDB
Position
11:complement(13685662..13728488)
AA seq 568 aa
MSHQPVSCLTEKGDSPNETTGNGPPNLAHPNLDAFTPHELLQQMRELLRENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLFSEAQSKEAKERLAAMSLENEKLKQELGKLRGKAER
SFEVPKAEAEQEVEQLKTQVARLQAEKVDLLGIVSELQLKLLNSGGPSEDSFVEIRMAEG
EAGVATKEIKPSPGPTRTDSIDTSKSAEGARNYLEFEELTVSQLLLCLREGNQKVERLEL
ALKEAKERISDFEKKAKDHCEIETQTEGCTEQEKEEEKGTETVGSEVETLKLQVTTLFKE
LQEAHTKLSEAELMKKRLQEKCQALERKNSAAPSELNEKQELVYNNRKLELQVESMRSEI
KMEQAKTEDEKSKLATLQLTHNRLLQEYNNALKTTEELKRRELEKVDKVVLQELSGKLEL
AEKALASKQLQMDEMKQTIAKQEKDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQL
ALQLAILLKENNAFEDGGSRQSLMEMQSRHGARASDADQQAYLVQRGAEDRNWMQQEQQN
IPIHSCPKCGEVLPDIDTLLIHVTDCII
NT seq 1707 nt   +upstreamnt  +downstreamnt
atgtcccaccaaccagttagctgcctgactgaaaagggggacagccccaatgaaaccaca
ggaaatggaccccccaatctggctcacccgaacctggacgcgttcaccccacatgagctg
ctgcagcagatgagagagcttctaagggagaaccatcagctgaaggaggccatgaagctg
aacaatcaagctatgaaagggcgatttgaggagctctcagcctggacagaaaaacagaaa
gaagaacgcctgttctctgaggcccagagcaaagaagccaaagagcgcctcgcggcgatg
agtcttgaaaatgaaaaactgaagcaagaacttggaaaactaagagggaaagctgaaagg
tcattcgaggtccccaaggcagaagcagaacaggaagtggaacagctgaagacccaggtg
gcacgccttcaagctgaaaaggtcgatctgctgggcatcgtgtctgaattacaactcaag
ctgctgaactcaggtggcccctccgaagactcctttgttgaaatcaggatggctgaggga
gaagcaggtgtggcaacgaaagaaatcaagccaagtcctgggcccacaagaactgattcc
attgacacgagtaaatctgcagaaggtgccaggaattatttggaatttgaggaattaact
gtgagccagctcctgctttgtctaagggaaggaaaccagaaggtggagagacttgaactt
gccctcaaggaagccaaagaaagaatttctgattttgaaaagaaagcgaaggatcattgt
gagattgagacccagacagaggggtgcacagaacaagagaaagaagaggagaaaggcaca
gaaactgttggaagtgaagtggaaacgttgaaacttcaggtgacaaccctgtttaaggag
cttcaggaggctcacacgaaactcagtgaggctgagctaatgaagaagagacttcaggaa
aaatgtcaggcccttgaaaggaaaaattctgcagccccatcagagctgaatgaaaagcaa
gagcttgtttataataacagaaagttagagctccaagtagaaagcatgcgatcagaaatc
aaaatggagcaagcaaaaacggaagatgaaaagtccaaattagccactctacagttgaca
cacaacaggcttcttcaagaatacaataatgcactgaaaacaactgaggaactaaaaaga
agagagttggaaaaagtggataaggtggtgctgcaggaactgagtggaaagctggaactg
gcagagaaagccctggcttccaagcagctccaaatggatgagatgaagcagaccatcgcc
aagcaggagaaggacctggaaaccatggctgttctcagggctcagatggaggtttattgt
tctgactttcatgctgaaagagcagcaagagagaagattcatgaagaaaaggagcaactg
gcattgcagctggcaattttgctgaaagagaataatgcttttgaagatggaggcagcagg
cagtccctgatggaaatgcagagccgtcatggggcgagagcaagtgacgctgaccagcag
gcttatctcgttcaaagaggagctgaggatagaaactggatgcagcaggaacaacagaat
attccaattcattcttgccccaaatgtggagaagttctgcccgacatagatacactactg
attcatgttacggactgcatcatttaa

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