Physeter macrocephalus (sperm whale): 102987203
Help
Entry
102987203 CDS
T06011
Symbol
OPTN
Name
(RefSeq) optineurin isoform X3
KO
K19946
optineurin
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04137
Mitophagy - animal
pcad04140
Autophagy - animal
pcad05014
Amyotrophic lateral sclerosis
pcad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102987203 (OPTN)
04137 Mitophagy - animal
102987203 (OPTN)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102987203 (OPTN)
05022 Pathways of neurodegeneration - multiple diseases
102987203 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102987203 (OPTN)
Membrane trafficking [BR:
pcad04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102987203 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102987203 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102987203 (OPTN)
Xenophagy
Cargo receptors
102987203 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
CMD
Motif
Other DBs
NCBI-GeneID:
102987203
NCBI-ProteinID:
XP_007126098
Ensembl:
ENSPCTG00005011312
UniProt:
A0A2Y9FLQ9
LinkDB
All DBs
Position
11:complement(13685662..13728488)
Genome browser
AA seq
568 aa
AA seq
DB search
MSHQPVSCLTEKGDSPNETTGNGPPNLAHPNLDAFTPHELLQQMRELLRENHQLKEAMKL
NNQAMKGRFEELSAWTEKQKEERLFSEAQSKEAKERLAAMSLENEKLKQELGKLRGKAER
SFEVPKAEAEQEVEQLKTQVARLQAEKVDLLGIVSELQLKLLNSGGPSEDSFVEIRMAEG
EAGVATKEIKPSPGPTRTDSIDTSKSAEGARNYLEFEELTVSQLLLCLREGNQKVERLEL
ALKEAKERISDFEKKAKDHCEIETQTEGCTEQEKEEEKGTETVGSEVETLKLQVTTLFKE
LQEAHTKLSEAELMKKRLQEKCQALERKNSAAPSELNEKQELVYNNRKLELQVESMRSEI
KMEQAKTEDEKSKLATLQLTHNRLLQEYNNALKTTEELKRRELEKVDKVVLQELSGKLEL
AEKALASKQLQMDEMKQTIAKQEKDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQL
ALQLAILLKENNAFEDGGSRQSLMEMQSRHGARASDADQQAYLVQRGAEDRNWMQQEQQN
IPIHSCPKCGEVLPDIDTLLIHVTDCII
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaaccagttagctgcctgactgaaaagggggacagccccaatgaaaccaca
ggaaatggaccccccaatctggctcacccgaacctggacgcgttcaccccacatgagctg
ctgcagcagatgagagagcttctaagggagaaccatcagctgaaggaggccatgaagctg
aacaatcaagctatgaaagggcgatttgaggagctctcagcctggacagaaaaacagaaa
gaagaacgcctgttctctgaggcccagagcaaagaagccaaagagcgcctcgcggcgatg
agtcttgaaaatgaaaaactgaagcaagaacttggaaaactaagagggaaagctgaaagg
tcattcgaggtccccaaggcagaagcagaacaggaagtggaacagctgaagacccaggtg
gcacgccttcaagctgaaaaggtcgatctgctgggcatcgtgtctgaattacaactcaag
ctgctgaactcaggtggcccctccgaagactcctttgttgaaatcaggatggctgaggga
gaagcaggtgtggcaacgaaagaaatcaagccaagtcctgggcccacaagaactgattcc
attgacacgagtaaatctgcagaaggtgccaggaattatttggaatttgaggaattaact
gtgagccagctcctgctttgtctaagggaaggaaaccagaaggtggagagacttgaactt
gccctcaaggaagccaaagaaagaatttctgattttgaaaagaaagcgaaggatcattgt
gagattgagacccagacagaggggtgcacagaacaagagaaagaagaggagaaaggcaca
gaaactgttggaagtgaagtggaaacgttgaaacttcaggtgacaaccctgtttaaggag
cttcaggaggctcacacgaaactcagtgaggctgagctaatgaagaagagacttcaggaa
aaatgtcaggcccttgaaaggaaaaattctgcagccccatcagagctgaatgaaaagcaa
gagcttgtttataataacagaaagttagagctccaagtagaaagcatgcgatcagaaatc
aaaatggagcaagcaaaaacggaagatgaaaagtccaaattagccactctacagttgaca
cacaacaggcttcttcaagaatacaataatgcactgaaaacaactgaggaactaaaaaga
agagagttggaaaaagtggataaggtggtgctgcaggaactgagtggaaagctggaactg
gcagagaaagccctggcttccaagcagctccaaatggatgagatgaagcagaccatcgcc
aagcaggagaaggacctggaaaccatggctgttctcagggctcagatggaggtttattgt
tctgactttcatgctgaaagagcagcaagagagaagattcatgaagaaaaggagcaactg
gcattgcagctggcaattttgctgaaagagaataatgcttttgaagatggaggcagcagg
cagtccctgatggaaatgcagagccgtcatggggcgagagcaagtgacgctgaccagcag
gcttatctcgttcaaagaggagctgaggatagaaactggatgcagcaggaacaacagaat
attccaattcattcttgccccaaatgtggagaagttctgcccgacatagatacactactg
attcatgttacggactgcatcatttaa
DBGET
integrated database retrieval system