Physeter macrocephalus (sperm whale): 102987212
Help
Entry
102987212 CDS
T06011
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
102987212 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
pcad04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
102987212 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Ig_DSCAM-DSCAML_C
EGF_Teneurin
cEGF
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
102987212
NCBI-ProteinID:
XP_023980312
Ensembl:
ENSPCTG00005012449
UniProt:
A0A2Y9SS86
LinkDB
All DBs
Position
2:138239347..138328521
Genome browser
AA seq
1413 aa
AA seq
DB search
MPRGATWALLLAAALGLGARGVRGAVALADFYPFGAERGDAVTPKQDDGGSGLRPLSVLF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDAATLRRATQDVRRYFPELPGFSATWVFIATWYRVTFFGGGSSSPVNTFQTVLITDGK
LSFTIFNYESITWTTGTHASSGGDAAGLGGIAAQAGFNAGDGQRYFSIPGSRTADVAEVE
STTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL
SGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFICQCPAGFGGPTCETAQSPCDAKECEN
GGRCQAEGGSAVCACAAGYTGAACETDVDECGSDPCLNGGSCVDLVGNFTCLCSEPFEGP
RCETGSRPVPDACLSAPCQNGGTCVDADQGYVCECPEGFMGLDCRERTPNNCECRNGGRC
LGANTTLCQCPPGFFGLLCEFEVTAMPCNVNTQCPDGGSCMEYGGSYLCVCHTDHNVSHS
LPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGRHCEKARPRLCSSGPCRNGGTCKEAGG
EYRCDCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNGGACEALGTDFSCHCQAGYTGRRCQAEVDCGPPKGVTPATLHFSGTRLGSVA
LSSCDRGYSPSTSNRTGVCRPQGVWSEPPQCHDIDECLSQPCLHGGSCQDRVAGYLCVCG
PGHEGARCELETDECLTQPCRNGGSCRDLPGAFVCQCSPGFVGVRCETEVDACDSRPCQH
GGRCENGGGAYLCVCPEGFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKAGYTGK
DCAKELCPPTALKVERVEESGVSISWRPPEGPAARQMLDGYAVTYASSDGSYRRTDFVDR
GRSSHQLRALAAGRAYNVSVFSVKRNANNKNDISRPAVLLIRTRPRPVEGLEVTNVTASA
ISVRWALHRIRHATVSSVRVSIRHPKAQEDESTDVDKGVDKFTFRALLPGRRYTIWVTAL
SGLGGQEHPTESLASAPLHVWTRPLPPANLTAARVTATSAHVVWDAPTPGTSLEAYVINV
STSQSTKSRYVPNGRLASYTVRDLTPGRRYQLSVTAVQSAGGDQLHSEPAHLYIITSARD
GADRRWHREGPAPRALRTRPAPARLPELRLLDDPGAPAPPTQAPRFSQLVDGRGRVSASF
RSSPGRRVTVRSQPTALVQLENAEEVPEQVSLALQLPGRSGDKGVESAPGNCSENPCQNG
GTCVPGEDAHSCDCSPGFKGRHCELACRKVPQPCTRLFSETKSFPVWEGGVCHHVYKRVY
KVHPDTCFKESCESTRARTPDRKQSNSPTLKKS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcggcgccacctgggcgctgctcttggccgcggccctggggctcggggcgcgc
ggcgtgcgcggcgcggtggccctcgccgacttctacccgttcggcgcggagcgcggcgac
gccgtcacccccaagcaggacgacggcggctccgggctgcggccgctctccgtgctcttc
ccgttcttcggcgccgagcactccggcctctacgtaaacaacaacgggatcatctccttc
ctgaaggaggtttctcagttcaccccagtggccttccccatcgccaaggaccgctgcgtg
gtggcggccttctgggcggacgtggacaaccggcgtgcgggcgacgtgtactaccgggag
gccaccgacgcagccacgctgcgcagggccacacaggatgtcaggcgctacttccccgag
ctcccaggcttctccgccacctgggtgttcatagccacctggtaccgcgtgaccttcttc
ggaggcggctcctcttcccccgtcaacacgttccagaccgtgctcatcaccgatggcaag
ctctccttcaccatcttcaactacgagtctatcacgtggaccacgggaacgcacgccagc
agcgggggcgacgccgctggtctggggggcatcgcggcccaggccggcttcaatgcgggc
gacgggcagcgctacttcagcatccccggctcacgcacggcggacgtggcggaggtggag
agcaccaccaacgtaggcgtgcccgggcgctgggcgttccgaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctccgtgtgcctggccctgcgcccctgcctcaac
ggcggcaagtgcatcgacgactgcgtcacgggcaacccctcctacacctgctcctgcctc
tcgggcttcacggggaggaggtgccacctggatgtgaacgagtgtgcttcccacccgtgt
cagaacggcgggacctgcacgcacggcgtcaacagcttcatctgccagtgcccggccggc
ttcgggggccccacctgtgagacagcacagtctccatgcgatgccaaagagtgtgagaac
ggcggccggtgccaggcggagggcggctccgcggtgtgcgcgtgcgcggccggctacacg
ggtgcagcctgcgagacggatgtggacgagtgcggctctgacccctgcctgaacggaggg
tcgtgtgtcgacctggtggggaatttcacctgcctttgttcagagcccttcgagggacct
cgctgcgagacaggaagccgcccggtgcccgacgcctgcctctcggccccctgccagaac
gggggcacctgtgtggatgcggaccagggctacgtgtgcgaatgccccgagggcttcatg
ggccttgactgcagggagagaacccccaacaactgcgagtgccgcaatggtggcaggtgc
ctgggggctaacaccaccctctgccagtgccctccgggcttctttgggctcctctgcgaa
tttgaagtcacggccatgccctgcaacgtgaacacgcagtgccccgacggcggctcctgc
atggagtacggcgggagctacctgtgcgtctgccacaccgaccacaacgtcagtcactcg
ctgccgtccccctgcgactcggacccctgcttcaacggaggctcctgtgacgcccacgac
gactcctacacgtgcgagtgcccacggggcttccacggccggcactgcgagaaagcccgg
ccgcgcctgtgcagctcggggccctgcaggaacggcggcacatgcaaggaagcgggcggc
gagtaccgctgcgactgcccctaccgcttcaccgggaggcactgcgagatcgggaagcca
gactcatgcgcctcgggcccctgtcacaacggcggcacctgcttccactacatcggcaaa
tacaagtgtgactgtcccccaggcttctcgggacggcactgcgagatagccccctccccc
tgcttccggagcccgtgcatgaatgggggtgcctgcgaggccctggggacagacttctcc
tgccactgtcaagcagggtacacaggacgccggtgccaggcagaggtggactgcggcccg
cccaagggggtgacgcccgccaccctgcacttcagcggcacccgtctgggctcggtggcc
ctgtcctcgtgtgaccgaggctacagcccgagcacctccaaccgcaccggcgtctgccgg
ccacagggcgtctggagcgagcctccccagtgccacgacattgacgagtgcctatcccag
ccgtgcctgcatgggggctcctgccaggaccgcgtcgctgggtacctgtgtgtctgcggc
ccagggcacgaaggagcccgctgcgagctggagacagacgagtgcctgacgcagccctgc
agaaacggaggctcctgcagggacctcccgggggcctttgtctgccagtgctccccaggc
ttcgtgggagtccgctgcgagacagaggtggacgcctgcgactccaggccctgccagcac
ggaggccggtgcgagaacgggggcggggcctacctgtgtgtctgcccagagggcttcttc
ggctaccactgcgagacagtgagcgacccctgcttctccagcccctgtgggggccgcggc
tactgcctggccagcaacgggtcccacagctgcacctgtaaagcgggctacacgggcaag
gactgtgccaaagagctctgcccaccaacggccctcaaggtggagcgagtggaggagagc
ggggtctccatctcctggcgcccacccgaaggcccagccgcccggcagatgctcgacggc
tacgccgtcacctacgcctcctccgacggctcctaccgccgcacggacttcgtggaccgg
ggccgctcctcgcaccagctgcgggccctggcggccggcagggcttacaacgtctccgtc
ttctcggtcaagcgcaacgccaacaacaagaacgacatcagcaggcctgcggtgctgctc
atccgcacgcgaccccgccccgtcgagggccttgaggtcaccaacgtgactgccagcgcc
atctcggtgcgatgggctctgcacaggatccgccacgccaccgtcagcagcgtccgcgtg
tccatccgccaccccaaggcccaggaggatgagtccaccgacgtggacaagggtgtggac
aagttcacattcagggccctgcttccaggaaggagatacaccatctgggtgactgccctc
agcgggcttggggggcaggagcatcccaccgagagcctggcctcggcaccactgcacgtg
tggacccggcctctgccgccagccaacctgaccgcggcccgagtcacggccacctctgcc
cacgtggtctgggatgcccccaccccgggcacctcactggaggcctacgtcatcaacgtg
agcactagccagagcaccaagagccgctacgtccccaacgggaggctggcgtcctacaca
gtgcgggacctgacgcccggacggcggtaccagctgtcggtgacggccgtgcagagcgcc
gggggcgaccagctgcacagcgagcccgctcacctgtacatcatcacctccgcgagggac
ggcgccgacagacgctggcaccgggaaggacccgccccgcgcgcgctcagaacccgaccg
gcccccgcgcgcctgccggagctgcgcctgctcgacgaccccggcgcccccgcaccgccg
acccaggcccccaggttctcgcagctcgtggacggcagaggacgagtgagcgccagcttc
cgcagctcgcctggcagacgggtcactgtgagatcacaacccacggctctggtgcagctg
gagaacgcggaggaggtccccgagcaggtcagcctggccctccagctccccggacgcagt
ggtgacaagggtgtggaaagtgcccctgggaactgttcagaaaacccctgtcagaacgga
ggcacctgtgtacctggtgaggacgcgcacagctgtgactgcagcccgggcttcaaaggc
agacactgtgagcttgcctgtagaaaggtgccccagccctgcacacggctgttctcggag
acaaagtcctttccggtctgggaaggaggcgtctgtcaccacgtgtataaaagagtctac
aaagtgcatccagacacctgtttcaaagagagctgtgagagtacgcgcgccaggacccca
gacaggaaacaaagtaacagtcctacactgaagaaatcttaa
DBGET
integrated database retrieval system
