Physeter macrocephalus (sperm whale): 102987446
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Entry
102987446 CDS
T06011
Symbol
PTAFR
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04020
Calcium signaling pathway
pcad04080
Neuroactive ligand-receptor interaction
pcad05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102987446 (PTAFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102987446 (PTAFR)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
102987446 (PTAFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pcad04030
]
102987446 (PTAFR)
G protein-coupled receptors [BR:
pcad04030
]
Rhodopsin family
Others
Platelet activating factor
102987446 (PTAFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
102987446
NCBI-ProteinID:
XP_007100964
Ensembl:
ENSPCTG00005004040
UniProt:
A0A2Y9EEF2
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Position
3:13533158..13578112
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AA seq
343 aa
AA seq
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MTSCSFQPTVMEANYSSRVDSEFRYTLFPIFYSVIFVLGVLANSYVLWVFARLYPSKKFN
EIKIFMVNLTMADLLFLVTLPLWIIYYYNKGNWILPEFLCNLAGCFFFINTYCSVAFLAV
ITYNRYQAVTQPIKTAQVTTRKRGIILSLIIWLAIVAAASYFFFLDSTNTVPNKAGSGNI
TRCFENYNKGSIPVLIIHIFLVFSFFLVFLIILVCNLVIIVTLLTQPVQMQRNTEVKCRA
LWMVCTVLAVFIICFVPHHIVQLPWTLAELGFQNSNFHQAINDAHQVTLCLLSTNCVLDP
IIYCFLTKKFHKHLMEKFNSMRSSQKCSRVTTETGTEVVMPLK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctgctcattccagcccacagtgatggaggcaaattattcctctcgtgtggat
tctgagttccgatacaccctcttcccaattttttacagcgtcatctttgtgttgggggtc
ctcgccaacagctatgtgctgtgggtctttgcccgcctgtacccttccaagaaattcaat
gagataaagatcttcatggtgaacctcaccatggctgacctgctcttcctggtcaccctg
cccctgtggatcatctactactacaacaagggcaactggattcttcctgaattcctgtgc
aacctggctggctgcttcttcttcattaacacatactgctcagtggcctttttggctgtc
atcacttataaccgctaccaggctgtaacacagcccatcaagaccgctcaggtcaccacc
cgcaagcgtggcatcattttgtccttgatcatctggttggccattgtggccgctgcatcc
tacttcttcttcctggactccaccaacacagtgcccaacaaggctggctcaggcaacatc
acacgctgctttgagaactacaataagggcagcatcccagtcctcatcatccacatcttc
ctcgtgttcagcttcttccttgtcttcctcatcatcctcgtttgcaacctggtcatcatc
gtcacgctgctcacacagccggtgcagatgcagcgcaacacagaggtcaagtgccgggca
ctctggatggtctgcacggtcctggctgtgttcatcatctgctttgtgccccaccacata
gtacagctgccctggaccctggctgagctgggcttccagaacagcaacttccaccaggct
attaatgatgcacatcaggtcactctctgcctccttagtaccaactgtgtcttagacccc
atcatctactgtttccttaccaagaagttccataagcacctcatggagaagttcaacagt
atgcgcagcagccagaaatgctcccgggtcaccacggagacaggcaccgaagtggtcatg
ccgctcaaatag
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