KEGG   Physeter macrocephalus (sperm whale): 102987486
Entry
102987486         CDS       T06011                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad01524  Platinum drug resistance
pcad03430  Mismatch repair
pcad05200  Pathways in cancer
pcad05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    102987486 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102987486 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    102987486 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    102987486 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcad03400]
    102987486 (MSH2)
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     102987486 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27
Other DBs
NCBI-GeneID: 102987486
NCBI-ProteinID: XP_007106909
Ensembl: ENSPCTG00005012352
UniProt: A0A2Y9EQ44
LinkDB
Position
12:63510895..63589359
AA seq 934 aa
MAVQPKETLQLESGAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYMGPTGAKSLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQIGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLCAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRGLNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQA
LEKYEGKHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKIQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLASLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATRVRAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKPQEYDEMEPAAKRCYLEREQGEKIIQEFLSKVKQVPFAEMS
EENVVLKLKQLKAEVIAKNNRFVNEIISRIKVTT
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggagacgctgcagctggagagcggggccgaggtcggcttcgtg
cgcttcttccagggcatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccgggaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaagtacatggggccgacaggagcaaagtctctggagagtgttgtgctt
agtaaaatgaattttgagtcctttgtaaaagatcttcttctagttcgtcagtacagagtt
gaagtttataagaatagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaacgat
atgtcagcttccattggtgttgtgggtgttaaaatgtctacagttgatggccaaagacag
attggagttgggtatgttgactccatacagaggaagctaggactgtgtgagtttcccgat
aatgatcaattctccaatctggaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttccacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacagatgaatagtgctgtgttgccagaa
atggagaatcaggttgcagtttcttcattgtgtgcagtaatcaagtttctagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagaggccttaaccttttccagggttccgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggacaagaacagaatagaagagagatta
aatttagtagaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtataaatcaactccctaatgttattcaggct
ctggaaaaatatgaaggaaaacatcaggcattgttgttggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaacttgagtgaa
ttaagagaaataatggatgacttagaaaagaagattcagtcaacattaataagtgcagct
agagatctaggcttggatcctggcaaacagattaaactggattccagcacacaatttgga
tattattttcgtgtaacatgcaaggaagaaaaagtccttcgtaataataaaaatttcagt
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattggcttctctcaat
gaagagtataccaaaaataaaacggaatatgaggaagcccaggatgccattgttaaggaa
attgtcaatatttcttcaggctatgtagaaccgatgcagacactaaatgatgtgttagct
cagctagatgctgttgtcagctttgctcatgtgtccaatggagcacctgttccatatgta
cggccggtcattttggaaaaaggacaagggagaattatactgaaagcatccagacatgca
tgtgtggaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggtcccaacatgggaggtaaatcaacatatattcgc
cagactggggtggtagttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccatcgtggactgcatcttggcccgggtaggggctggtgacagtcagttgaaa
ggagtctccacattcatggccgaaatgttagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaattgggaagaggaacctctacctatgacggattt
gggttagcatgggctatatcagagtacattgcaacaagggtccgtgctttttgcatgttt
gcaacccattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcatgttgccgagcttgctaatttccccaggcatgta
atagagtgtgctaaacaaaaggccctggaactagaggagtttcagaatattgggaaacca
caggaatatgatgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagagtttttatccaaggtaaagcaagtgccctttgctgaaatgtca
gaagaaaacgtcgtactgaagttaaaacagctgaaagctgaggtgatagcaaagaataat
cgttttgtaaatgaaataatttcaagaataaaggtaactacatga

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