Physeter macrocephalus (sperm whale): 102987516
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Entry
102987516 CDS
T06011
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102987516 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102987516 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pcad04090
]
102987516 (MSR1)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102987516 (MSR1)
CD molecules [BR:
pcad04090
]
Proteins
102987516 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
YwhD
CENP-F_leu_zip
Seryl_tRNA_N
Cauli_AT
Motif
Other DBs
NCBI-GeneID:
102987516
NCBI-ProteinID:
XP_054936846
Ensembl:
ENSPCTG00005021524
UniProt:
A0A9W2WC77
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All DBs
Position
20:complement(101853641..102078911)
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AA seq
454 aa
AA seq
DB search
MEPWESFHNQQEDTDSCTESVKFDARSMTTLLPPNPKNGPTLQEKMKPFKAALIALYLLV
FVVLVPIIGIVAAQLLKWEMKNCTVGSVNANDISPSLTGKGNDSEDAMRFRDVVTEHMSN
VEKRIQYLSDNEANLIDAKNFQNFSVTIDQRFNDVLLQLSSLLSFTQGHGNVIGEVSKSL
ISLNTTMLDLQLSIATLNAKVQENAFKQQEEMSKLEERVYNTSAEIKSLEEKQVHLEQEI
KGEVKLLNNITNDLRLKDWEHSQTLKNITLIQGPPGPPGEKGDRGATGEVGPRGIPGPVG
PPGLKGDRGSIGFPGSRGFPGSVGKTGRPGNSGPKGQKGEKGSGSVLTPSKTVRLVGGSG
PHEGRVEIFHDGQWGTVCDDRWELRGGQVICRSLGYQGARNVHKGAYFGQGTGPIWLNEV
FCFGRESSIEECKIRQWGVRVCSHDEDAGVTCNT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatgggagagctttcacaatcaacaggaggacactgatagctgtacagaatct
gtgaagtttgatgctcgctcaatgaccactttgcttcctccgaatcctaaaaatggccca
actcttcaagagaaaatgaagcctttcaaagctgcactgattgccctttatctccttgtg
tttgtagttcttgtacctatcatcggaatagtggcagctcaactcctgaaatgggaaatg
aagaattgcacagttggttcagttaatgcaaatgatatatctccaagtctcacaggaaaa
ggaaatgacagtgaagatgcaatgagatttcgagacgtcgttacggaacacatgagcaac
gtggagaagagaatccagtatctttcagataatgaagccaatctcatagatgccaagaat
ttccaaaatttcagtgtaacaatcgatcaaaggtttaatgacgttcttctccagctaagc
tccttactttccttcacccagggacatggaaatgtaataggtgaagtctccaagtcatta
ataagtctgaacaccacaatgcttgatttgcagctcagtattgcaacactgaatgccaaa
gtccaagagaatgcatttaaacaacaagaggagatgagtaaattagaggagcgtgtgtac
aatacatcagcagaaattaagtctctggaagaaaaacaagtgcatttggaacaggaaata
aaaggagaagtgaaactgttgaataacatcactaatgatctcaggctgaaggattgggaa
cattctcaaacactgaaaaatataactttaattcaaggtcctcctggacctccaggtgaa
aaaggagatagaggtgccactggagaagttggtccacgaggcattccaggtccagtaggt
cctccaggtcttaaaggtgatcggggatccattggttttcctggaagtcgaggattccca
ggatcagtggggaagaccgggaggccaggaaattctggaccaaaaggccagaagggggaa
aaagggagtggaagcgtgctaacaccgtctaagacagttcgactggttggtggtagcggc
cctcacgaaggcagagtggaaattttccatgatggccagtggggtacagtttgtgacgac
cgctgggaattgcgtggaggacaggtcatctgtaggagtttgggataccaaggtgctcga
aatgtgcataagggagcttattttggacaaggtactggtccaatatggctgaatgaagta
ttttgttttgggagagaatcatctattgaagagtgtaaaattagacaatggggtgtgaga
gtctgttcacatgatgaagatgccggggtcacttgcaatacataa
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