Physeter macrocephalus (sperm whale): 102987713
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Entry
102987713 CDS
T06011
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03030
DNA replication
pcad03410
Base excision repair
pcad03420
Nucleotide excision repair
pcad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102987713 (RFC4)
03410 Base excision repair
102987713 (RFC4)
03420 Nucleotide excision repair
102987713 (RFC4)
03430 Mismatch repair
102987713 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcad03032
]
102987713 (RFC4)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102987713 (RFC4)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102987713 (RFC4)
DNA replication proteins [BR:
pcad03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102987713 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
102987713 (RFC4)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102987713 (RFC4)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102987713 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
102987713 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_assoc_2
Rad17
AAA_16
DUF815
AAA_22
AAA_11
AAA_30
Mg_chelatase
AAA_24
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_19
AAA_5
ResIII
AAA_7
Motif
Other DBs
NCBI-GeneID:
102987713
NCBI-ProteinID:
XP_007116338
Ensembl:
ENSPCTG00005010852
UniProt:
A0A2Y9F8K7
LinkDB
All DBs
Position
1:complement(79410468..79424151)
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGTSISSKPPLTKDRGVAATARSSGESKKAKPVPWVEKYRPKYVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVTGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAGKEHIKISNEGLAHLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGVIPAETIDGVFAACQSGSFDKLEAVVKDLIDDG
HAATQLINQLHDGVVENDNLSDKQKSVITEKLAEVDKCLADGADEHLQLISLCATVMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctaaaaggcacatctatcagcagtaaaccaccattgactaaggatcga
ggagtagctgccactgccagaagtagtggagagagcaagaaagccaaacctgttccgtgg
gtggaaaaatatcgcccaaaatacgtggatgaagttgctttccaggaagaagtggttgca
gtgctaaaaaagtctttagaaggagctgatctccctaatctcttgttttacgggccacct
ggaactggaaaaacatccactattttggcagcagctagggaactctttgggcctgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttaga
gagaaagtgaagaattttgcccaattaactgtgacaggaagccgttcagacgggaagcca
tgtcctccttttaaaattgtgatcctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaagagtctaaaactacccgattctgtctcatctgt
aactatgtcagtcgaataattgaacctctgacctctagatgttctaaattccgcttcaaa
cctctgtcagataaaattcaacagcagcgattactagacatcgctggtaaagaacatatc
aaaattagcaatgagggactagctcatcttgttaaagtgtcagaaggagacttaaggaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggaggtcacagaaaag
gtgatcacagacattgctggggtaataccagctgaaacaattgatggagtatttgctgca
tgtcagagtggctcttttgacaaactagaagctgtggtaaaggacttaatagatgacggt
catgcagcaactcagcttataaatcaacttcatgatggggttgtagaaaatgataacctt
tctgataaacagaagtctgttattacagaaaaacttgctgaagttgataaatgcttagca
gatggtgctgatgaacatctacagctgatcagcctctgcgcaactgtcatgcagcagtta
actcagaattgttaa
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integrated database retrieval system