Physeter macrocephalus (sperm whale): 102987807 Help Entry 102987807         CDS       T06011                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism pcad  Physeter macrocephalus (sperm whale) Pathway pcad05014   Amyotrophic lateral sclerosis pcad05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:pcad00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     102987807 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     102987807 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pcad03400]     102987807 (SPG11) DNA repair and recombination proteins [BR:pcad03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      102987807 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  102987807 NCBI-ProteinID:  XP_007116055 Ensembl:  ENSPCTG00005019767 UniProt:  A0A2Y9F716 LinkDB All DBs Position 11:94146611..94227861 Genome browser AA seq 2445 aa AA seqDB search MAADKGAGSAEAVERVLPVLLVPVPAEATGRLGSRAQLHREQEVLGSLTAAGNLHVLPLA PGGRGGGGCLLEGPFRQFVWEDSHNSGTPTDKPRLLALSENNELLICEFNLKDGSCDATI SYSYTEETLQKLVEDQIISISLLSLRILSFHSNTSLLFINEYIILHIIFPERDAEIRVLN CFTLSLPAQAVDRIIDTQLCRGILFVLSRLGWIYIFDTVDGRHVAHVDLALPQEDMYNEQ QQEPAKSSSFTSLKVSQDLDVVVIVSSSNTAIALNLNLYFRQYPGHLLCERTLEDIPIEG PKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNETIKNSKLEGTCCAPWFQDILHL EPPESGNHSTSVRNWAFTPQDVMCSQYSFSQKGPAKTSDSGRSWKRIHISEQEEPLELTC MSVTGFTALFTWAVERTGCTIVLWDLETQSMQCFSLGKKCIPVDSGGDQLCLVLTEDGLS LILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFLK SKENLLSPSSNSSVPDQFDHFPSHLYLKHVEELTPALDLLCSAIRENDSETQSKHFSEQL LNLTLSFLNKQIKELFIHNEELDEHLQKGVNILTSYINELRTFMIKFPWKLTDAVDEYDV NENVPKVKESNIWEKLSVEEVIANAILNNKIPEAQTFFRINSHSAQRLEELIRIGLDLVF DNLKKNNIKEASELLKNMGFNVKDQLLKICFYTTDKNIRDFLVEILKEKNYFSEKEKRTI DFVHQVEKFYSGHFQENMQIQSFSRYSIKEQDFFKHKSVLDSFLKYDHKDTDKLNKQDHR IVLTWAQWWNQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWFSIILWIGEFQTRNS YASLQQNKWPPLTVDVVDQNTCCNNYMRNEILDTLARNGIFLTSELEDFELFLKRLNRIG GVMQDTLPVQNYRSKDGWDFHCHFILYCLEHSLQYLLYVFLDYYKLNPPNCPFLDKKELH EAHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHTLLALATT MYAPGGVSQVVQNEENENCVKKVDPQLLKMALTPYPKLKTALFPQYTAPSVLPPDITLYH LIQSLLPFDPSRLFGWQSANTLTIGDAASQLPHFSSPDLVNKYAIVERLNFAYYLHHGRP SFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFHIPSIGAACVCFLELLGLDSLKL RVDMKVANIILSYTRRNEDAQYNFIRESLAEKLSKLAVGEKSTIEELLVLLEEGIWDSIQ QQEIKRLSSESSSQWALVVQFCRLHNLKLSTSYLRECAKANDWLQFIIHSQLHNYHPEEV KSLLQYFSPVLQDHLRLAFENLPSVSKSRMDSDQVCNKSPQELQRNKLEMTDFFEILLQC SEVPNSWCWLLAEAVKQQAPILSVLASCVQDASAIPCLCVWIITSVEHSVAAEAMGHIQD SMEGHIWDLEDLSVIWRTLLTRQKSKTLIRGFQLFFKESPLLFMMEMYELCMFFKNYEEA EAKLLEFQKSLETLETAATRVHAVIPAPWLKEHVCFLLKLMLQQCRTQYELGKLLQLFVG IEHLFSDGKTILTGPDVKKLCVLSQILKDTSIAINRVIITSYSLENFQHECRSILEKLET EGYFALARRVAELAELPVDNLVIEEITQEMQTLKHIDQWSLKQARIDFWKKCHEDFKKNS ISSKAASSFFSAQALTACECPAEEGPSSTEERHLLLTLAGHWLAQEDLVPLEELEELEKQ TWLCRITQHTLRGNQEEIDPRCSQQISTSGELSFESLASEFSFSKLAALNTSKYLEFNGL PSKDSCENKLNWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALASG EASVDDLHPEIHALLQSAELLEEEEEPGIPLRKVQSTSSLDSQSFVMLPPSDEVVTTLET LTSKCLHGKNYCRQVLCLYALAKELGCSYTDVAAQDGEAILRVILASQQPDRCKRAQAFI STQGLEPDTVAELVAEEVTRELLTPSEGTGGHKQTFTPTEESQTFLQLTAVCQDRTLVGM KLLDKISSIPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDNHLAPSEEYGL VVRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKH NMIALCFSMCREIGENHEAAACIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAES YAKDSCVRQALHCHRLTKLITLQIHFLNTGQNTMLINLGRHRLMDCIMALPRFYQASIVA EAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLRSSIFEEISIKCKHHQPTDLVVKNL KKLLTYCEDVYLYYKLAYEHKFYDVVNVLLKDPQTGCCLKDMLAG NT seq 7338 nt NT seq  +upstreamnt  +downstreamnt atggctgcagacaagggggctggaagcgctgaagccgtggagcgggttctacccgtgttg ttggtgccggtccccgccgaggcaacagggcggctgggatcccgggcgcagttgcacagg gagcaggaggttctggggagcctgacggctgcaggcaaccttcacgtgcttcccttggcg cccggcggccggggcgggggcggctgcctcctggaaggcccttttcggcagtttgtatgg gaggactctcataacagtgggacaccaacagacaagcccagactgcttgctcttagtgaa aataatgaactgctcatatgtgaatttaatttgaaagatggaagttgtgatgcaaccatt tcatatagctatactgaggagacattgcaaaagctcgttgaagatcaaattatcagtatt tccttattatctttgagaattctgtcatttcacagtaacacatcattattgttcatcaat gaatatatcatcctgcacattatatttcctgaaagagatgctgagattagggtactcaac tgtttcacgttatccttgcctgcacaggcagtggacaggattattgacacacagctctgc agaggaattctttttgttttgagtcgtttaggctggatctacatttttgacactgtggat ggtagacatgtagctcatgtggatttggcacttcctcaagaagatatgtataacgagcag caacaagagccagccaagagttcttcctttacttcactgaaagtgtctcaagacctagat gttgtagtgattgtcagctcctccaacactgcaattgctcttaacttaaatttgtatttc aggcaatacccaggacacctactatgtgaaagaacactagaagacattcctattgaaggc cctaaggggatagatgaagatgatcctgttaattctgactacaacatgaaactgaccaag ttttccttccaagttgatcggtcttggaaagcccagctgtcatcactgaatgaaacaata aagaactccaagctggaaggtacctgttgtgctccgtggttccaggatattttgcatttg gagccccctgaatctggtaaccacagtaccagtgtgcgaaactgggccttcactccacag gatgtaatgtgcagccagtatagtttttcacagaaaggtcctgccaagaccagtgattca ggaagatcatggaaaagaatacacatcagtgaacaggaggaaccccttgagcttacatgt atgtctgtgacaggcttcaccgcgctgtttacttgggcagttgaaaggacaggctgtacc attgtcctgtgggatttggagacccagagcatgcagtgtttttcgctgggcaagaagtgt attcctgtagacagtggtggagaccagctgtgccttgttttgacagaagatggactctct ctgattttgtttggtttgactcaagaggaatttttaaataggctaatgatccatggaagt gccagcactgtggactctctttgccatctcaatggttgggggaggtgctccatccccata catgcgctagaggcaggaatagaaaatcgtcagctggacacagtagatttctttttgaag agcaaggaaaatcttttgagtccatcctcaaactcttctgtacctgatcagtttgatcac tttccatcccatttatatttaaaacatgtggaagagctgacaccagcattggatttactt tgctcagcaattagagaaaatgattctgaaacccagagcaaacacttttcggaacaattg cttaatcttacactgtctttccttaacaaacaaataaaggaactttttattcacaatgaa gagctagatgaacatctacagaaaggagtgaacattttgaccagctacattaatgaactt cgaaccttcatgataaagtttccttggaagctaacagatgctgtagatgaatatgatgta aatgaaaatgtccccaaagtaaaggagagcaatatatgggagaagctcagcgttgaggaa gttattgccaatgccattttaaacaacaaaataccagaggcacaaactttcttcaggatt aacagtcattctgctcaaagactcgaggaattgattagaataggcctagatttggtcttt gacaatttgaaaaagaataatataaaggaagcctctgagcttttgaagaatatgggcttt aatgtaaaagaccagttgctcaagatatgcttctatacaactgataaaaacatacgggac tttttggttgaaattttaaaagaaaaaaattatttttctgaaaaagaaaagagaactata gacttcgtgcatcaagttgagaagttttattcaggacatttccaagaaaatatgcagatc cagtctttttccaggtattcgataaaggaacaagattttttcaagcacaagtctgttttg gactcattcctgaaatatgatcataaagatacagataaacttaacaagcaagatcacaga attgtgttaacttgggctcagtggtggaatcaactgacacaagaatccatccttctcccc aggataagtccagaagaatacaaatcttattctcccgaagccctctggagatacctcaca gctcgccatgattggttcagcattatcttgtggattggagaatttcagacccggaatagt tatgcctcacttcagcagaacaaatggccccctctgactgttgatgttgttgatcagaat acttgctgcaacaactacatgagaaatgaaattttagatactctggccaggaatggaatt tttcttacatctgaattagaagactttgaactctttctcaaaagactgaaccgtattggg ggcgtgatgcaagataccctccctgttcaaaactataggtccaaagatggttgggatttc cattgtcacttcattctctattgtttggaacacagtctgcagtatcttctttatgtcttt cttgactactacaaacttaatcctccaaattgtccctttttggacaaaaaagaattacat gaagctcacccttggtttgaatttttagttcagtgtcgacaagtttccagtaatttaaca gatcccaaactgatcttccaggctagccttgcaaatgctcagatactgattcccagcaac caggccagtgtaagcagtatgctattggaaggacataccctcctggcccttgctaccaca atgtatgcccctgggggcgtcagccaggttgttcagaatgaagaaaatgagaactgtgtg aagaaagtagatccccagctactgaagatggcattaactccttaccccaagcttaaaact gctctcttcccacagtacactgcccctagtgtcctgccaccagatattacactctaccac ctgattcagtcattattgccctttgatcctagcagattgtttggctggcagtctgccaac acactgactataggagatgcagcgagtcagctcccacatttctctagccctgacctggtt aataaatatgctatagtggaacgtctgaattttgcttattatttacatcatggacgacca tcgtttgcgtttggtacttttctggttcaggaattaaccaagagcaagacccccaagcag ctgatccagcaagtaggcaatgaagcctatgttttagggctctcctccttccacatacct tcaataggagctgcctgtgtttgtttcttagaactgcttggcctcgacagcctcaagctc agagttgatatgaaagtggccaatataattttgagctacacgcgtagaaatgaagatgct cagtacaactttatcagagagtctctagctgaaaaactatctaaactggctgtgggtgaa aagtcaactatagaagaattgcttgttctcttagaagaaggtatatgggacagcattcag cagcaggaaataaagaggttatccagtgaatccagcagccagtgggcattagtggtacaa ttctgcaggctccacaatctgaaactgagcacatcttaccttagagaatgtgccaaagca aatgattggttacagtttattattcacagccaactccataattaccacccagaggaggtg aaatctcttctccagtatttcagccctgttcttcaagaccacttaagactggcttttgag aacttaccttcggtgtccaagtctaggatggacagtgatcaagtctgcaacaagtcccca caggaactccaaagaaacaaattagagatgactgatttctttgaaattctgcttcagtgc tcagaggtgccaaactcctggtgctggctcctggcagaagcagtgaaacaacaggcccca atccttagtgtcctggcctcatgtgtccaggacgccagtgctattccttgcctctgtgtt tggatcatcacttctgtggagcacagtgttgcagcggaagcaatgggacacattcaggac tcaatggagggccatatctgggaccttgaggacctctcagtcatctggaggacgttatta acacggcagaagagcaaaactctcatcagaggtttccagcttttctttaaggagtcccca ttactattcatgatggagatgtatgaactgtgtatgttcttcaagaattatgaggaagcc gaagctaaacttctggagttccagaagagccttgaaactcttgaaacggcagccacaagg gtccatgctgtcattcctgccccatggctgaaggagcatgtgtgttttcttttgaagctt atgctgcagcagtgtaggacccagtatgagctggggaagcttttacagctgtttgttgga atagagcatctcttctctgatggtaagacaatacttacaggtccagatgtgaagaagctg tgtgtccttagccaaattttgaaggatacgtccatagccattaatcgtgtaattattacc agctacagccttgagaattttcagcatgaatgtagatcaattttagaaaaactggagaca gaaggatactttgctttggccaggagggtagcagaactagctgagctacctgtggacaac ttggttattgaagagataacacaggaaatgcagaccttaaaacacattgaccagtggtcc ctgaaacaagcaagaattgacttctggaaaaaatgtcatgaggattttaagaaaaattcc atttcaagcaaagcagcttcttcgtttttctcagcccaggctcttacggcatgtgagtgc ccagctgaagagggaccaagcagcactgaggagcgccatctgctgctcactctggcagga cactggcttgcccaggaagacctggtgcctttggaggagctggaggagctagagaagcag acctggctctgccgcatcacccagcacaccctcaggggaaaccaggaggaaatagacccc agatgttctcaacagatttcaactagtggtgaactttcctttgaaagcttagccagtgaa ttttcattctctaagttggctgctctgaacacatcaaaatacttagaatttaatggcctt ccatccaaagactcttgtgagaacaaactgaattggaaggagcaggagtccctaaacttt ttgattgggcgcctattggatgatggctgtgtgcatgaagcaagtagagtatgccgatat tttcatttctataaccaagatgttgccttggtgttgcattgcagagcactagcttcaggg gaagctagtgtggatgacctgcacccggagatccatgctctcttacaaagtgctgagctg cttgaggaagaagaagaacctggcattcctctaaggaaagtccaaagcacttcaagtttg gatagtcagtcatttgtgatgctgccccccagtgatgaagtggtgactactctggaaact ctgacaagcaaatgcctccatgggaagaattattgccggcaggtcctctgtctctatgca cttgccaaggagttgggctgttcctacacagatgtcgctgcccaggatggtgaggccatt ctccgggtaatcttggcctctcagcagcctgaccgatgcaagcgagctcaagccttcatc agcacccagggccttgagccagacacagtggctgaacttgtggctgaagaggtgacccgg gagctgctgaccccatcagagggaacaggaggacataagcagacgttcaccccaacagag gaaagccagacgtttcttcagctgactgctgtgtgtcaggaccgcacgttggtaggcatg aagttgttggataagatttcctccattccccatggggagttgtcttgcaccacagagctg ctgatcctggctcatcactgcttcacactgacatgccacatggagggcatcatccgagtc ctgcaggccgcccggctgctcacagacaaccacttggcccccagtgaggagtatggactg gtggtgcgtctcctcactggcattggtaggtacaatgagatgacatacatatttgatttg ctgcataaaaaacactactttgaagtgctgatgaggaagaagttggacccgagtggtacc ctgaagacggccctactggactacatcaaacgctgccgccctggggacagtgagaagcac aacatgattgccctgtgtttcagcatgtgccgggagattggggagaaccatgaggcagct gcctgcatccaactgaaattgattgagtctcagccctgggaggacagcctcaaggatggg caccaactgaagcagctgctgctgaaggccctgactctgatgctggatgcagcagagagt tatgccaaggactcctgcgtgcgacaggccctgcactgtcaccggctcaccaagttgata acactgcagattcactttctgaacaccggccagaacacaatgctcatcaacctgggccgc cacaggctgatggactgtatcatggccctacctcggttctaccaggcttctattgtggct gaggcctatgactttgttcctgattgggctgaaattctataccaacaagtgattcttaaa ggagactttaattacttggaagaatttaagcagcaaaggttattaagatccagtatattt gaagaaatttcaataaaatgtaaacatcatcagcctactgacttagttgtgaaaaacctg aagaagttactcacatattgtgaagatgtctacctgtattacaagctggcatacgaacac aaattttatgacgttgtaaatgtgcttctgaaggaccctcagacaggttgctgtctaaag gacatgctagcgggttag

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