Physeter catodon (sperm whale): 102987855
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Entry
102987855 CDS
T06011
Symbol
ARHGEF40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102987855 (ARHGEF40)
Membrane trafficking [BR:
pcad04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102987855 (ARHGEF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
PH_10
Motif
Other DBs
NCBI-GeneID:
102987855
NCBI-ProteinID:
XP_007104849
Ensembl:
ENSPCTG00005003451
UniProt:
A0A2Y9ELH1
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All DBs
Position
11:105964585..105987068
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AA seq
1522 aa
AA seq
DB search
MEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLA
KVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLA
LKCLAPGGGRVQELPVPNEACAYLFTPEWLQGVNKDRPTGRLSTCLLSAPSGIQRLPWAE
LICPRFVHKGGLMVGHRPSTLPPEVPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEG
EYVELLEVTLPVRGSPTDADGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRNQ
DGARPPGEGSSTGASPGSPPGAEAEAVPEAAALEVSEPPAEALGEASEFCPLRPGEVGGG
AGQGAEGPPGTPRRAGKGNRRKKRAAGRGALNRGGDSAPLSPGDKEETSHQDALVSLPPP
SEHELPGCGPVKEEHEGSGRPDPEPREELKPAEEKEPRPPEACGPVEERAREREQEGPRL
VRLAGPSNPEGLLSDPLAPSPETVQEVKGDSLPEEATPVSSSDDPGVAWDLMSSGCLVLT
GGVDQSGRALLTITPPCPPEEPPPSQDVLSAALHYLHSLLRPDLQVLGLSVLLDLRKAPA
LPPALIPVLSQLQDSGDPPLIQRLLLLTHDDPPTELHGFQGAELLSESDLKRVAKPEELH
WDLGGHRDPSPSHWVETHKEVERLCRLCRGVLGSVRRAIEELERAAEPEGEEAAGMPEPL
QKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPATLYQEVDEAIHQLVRLSNLHVQQ
QEQRQRLHRLQQVLQWLSGPGEEQLVSFAVPGDSLSALQETELRFRAFSAEVQERLAQAR
EALALEEDPASQKVLDIFEQRLEQVESGLHRALRLQRFFQQAHEWVDEGSTRLAGAGPGR
EAVLAALALRRTPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELEKRVQQQLGAE
ASPRGHRRRRADSASSGGAQRGSHSPSPSLRSLLLPSSPGPRAAPSHCSLAPCGEDSEDE
GPEPAPEAEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPEGPWGVGTPRMER
KRSISAQQRLVSELIACEQEYVATLSEPVPPAGPELTPELRGTWAAALSARERLRSFHRT
HFLRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLAALSPPTKGTMEGGPH
LPRALQQPLEQLARYERLLEELLREAGPEPSSERQALGAAMQLLREQETRGKDLLAVEAV
RGCEIDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEHLLLFSKLKGPEGGSETFVYKQAF
KTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEIKLKWTSSIAQLLWRQAAHNK
ELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSP
GACSLPARVEEEAWDLDVKQISLASPPAPETLASSGDVSPGPRNSPSLQRPGSSTPILAS
GGILGLSRQSHARALSDPTTPL
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgagccagtagaggactgtgtgcagagtactttggccgccctgtacccacct
ttcgaggcaacagcccctacactcttgggccaagtgttccaggtggtggagaggacttat
cgggaggatgcgctgaggtacacgctggacttcctggtgcccgccaagcacctgcttgcc
aaggtccagcaggaagcctgtgcccagtacagcggtttcctcttcttccacgagggctgg
cccctctgcctgcatgagcaggtagtggtgcagctagcagcactcccctggcagctgctg
cgcccaggagacttctacctgcaagtggtgccctcagcagcccaagcaccccgcttggca
ctcaagtgcctggccccagggggtgggcgagtgcaggaactgcctgtgcccaatgaggct
tgtgcttacctcttcacacctgagtggctacaaggcgtcaataaggacaggcccacaggt
cgcctcagcacctgccttctgtccgcaccctctgggattcagcgactgccctgggccgag
ctcatctgccctcgatttgtacacaaagggggcctcatggttggacatcggccaagcaca
cttcccccagaagtgccctccggacccccagggctccccagccccccactccctgaggag
gccctgggcactcggagtcccggggatgggcacaatgcccctgctgaaggacctgagggc
gagtatgtagagctgctggaggtgacgctgcctgtgagggggagccccacggatgctgac
ggctcctcgggcctctccaggacccggacggtacccacacgcaagggtgctggggggaag
ggccggcatcggagacaccgggcgtggatgcaccagaagggcctggggcctcggaaccag
gatggagcccgcccacccggtgaggggagcagcactggagcctcccctgggtctcccccg
ggagccgaggctgaggctgtccctgaggcagcagccctggaggtatctgagcccccagca
gaggcgctgggggaagcctctgagttttgccccctgaggccaggagaggtcggaggagga
gcaggccagggggctgaagggccgcccggtacccctcggagagcaggcaaaggaaacagg
agaaagaagcgagctgcaggcagaggggctcttaaccgaggaggagacagtgccccactg
agccctggggacaaggaagagactagccaccaggatgcccttgtcagtctgcctccacca
agtgaacacgagcttccaggatgcggcccagttaaggaggagcatgaaggctcggggagg
ccagaccctgagccgagagaggagctcaaaccagcagaagaaaaagagcctcggccccca
gaagcctgtgggcctgtagaagagagggccagagaaagagagcaggaggggccgaggctg
gtgcgcctggcagggcccagcaatccggaagggctcctgtctgaccccctggcaccatcc
ccagagactgtgcaggaagtgaaaggggacagcctcccggaagaggccactccagtctcc
agctctgatgaccctggtgtagcttgggacttaatgtcgtctggatgtctcgtcctgact
ggaggggtggatcagagtgggcgagctctgctgaccattaccccaccgtgccctcctgag
gagcctcccccctcccaagacgtgctgagcgctgctcttcattacctccactcactgctc
aggcctgacctacaggtactggggctgtccgtcctgctggaccttcgcaaggcacccgca
ctgcctccagcactcattcctgtcctgagtcaacttcaggactcaggagaccctccgctc
attcagcggctgctgcttctcactcatgatgaccctccaactgaactccatggatttcag
ggtgctgagttgctgtcagagagtgatctgaaaagagtggccaagccagaggagctgcac
tgggacttgggaggtcacagggacccctctcccagccactgggtagagacacacaaggaa
gtggaaaggttgtgccgcctgtgccgaggtgtgctgggatctgtacggcgagccattgag
gagctagagagagcagcagagccagagggagaggaggcggcaggaatgcctgagccccta
cagaaggtactggcagatccccggctgacggagctgcagagggatgggggagccatcctg
atgaggctgcgctccacccacagcagcaagctggagggcccaggcccagctacactgtat
caggaggtggacgaagccattcaccagctcgtgcgcctttccaacctacatgtgcaacag
caggagcagcggcaacgcttgcaccgactccagcaggtgctgcagtggctctcgggcccg
ggggaggagcagctggtgagctttgctgtgcccggggactccctgtccgccctgcaggag
acagagctacgattccgggctttcagtgctgaggttcaggagcgcctggctcaggcgagg
gaggccctggccctggaggaggaccctgcctcccagaaggttctggatatctttgaacag
cgcctggagcaggttgagagtggcctccaccgagctctgcggctacagcgcttcttccaa
caggcacatgaatgggtggacgaaggttccacgaggctagcaggagctgggccggggcgg
gaagcagtgctggcagccctggccctgcggcgcaccccggagcccagcgctggcaccttc
caggagatgcgggccctggccctggacctgggcagcccggcggctctgcgagagtggggc
cgctgccgggcccgctgccaagagctggagaagagggttcagcaacagctgggagcagag
gcgagtccacggggccaccggcgacgacgggcagacagtgccagcagcggaggggcccaa
cggggctcccatagcccctcacccagcctccgttccctgctgctccccagcagccctggg
ccgcgggcagccccgtcccactgctccctggcgccctgtggggaggactctgaggacgag
ggccccgagccggctccggaagcagagggcaggccgccgaggaccgtgctgatccgaggc
ctggaggtcaccagtacggaggtggtagacaggacgtgctcaccccgggaacatgtgctg
ctgggccgggccgggggcccagaagggccctggggagtaggcaccccccggatggagcgc
aagcgaagcatcagcgcccagcagcgtctggtgtctgagctgattgcctgtgagcaggag
tacgtggccaccctgagtgagccggtgccacccgctgggcctgagctgacccctgaactg
cggggcacctgggccgcagccctgagtgcccgggaaaggctccgcagtttccaccggaca
cacttcctgcgggagcttcagggctgcgccacccaccccctgcgcattggggcctgcttc
cttcgccatggggaccagttcagcctttacgcccagtatgtgaagcaccggcacaaactg
gagaatggtctggctgccctcagccctccaaccaagggcaccatggaagggggccctcat
ctgccccgggccctgcagcagcccctggagcagctggccaggtatgagcggctcctggag
gagctcctaagggaagctgggcctgaaccgagttctgagcgccaggcccttggggctgcc
atgcaactgctccgggaacaagagacccgcggcaaagacctgctggctgtggaggcggtg
cgtggctgcgagatagatctgaaggagcagggacaactcctgcaccgggaccctttcaca
gtcatctgtggccggaaaaagtgccttcgccacgtctttctctttgagcatctcctcctg
ttcagcaagctcaagggccctgagggggggtcagagacctttgtttataagcaggccttt
aagactgctgacatggggctaacagaaaacatcggggacagtgggctctgctttgagctg
tggtttcggcggcggcgtgcacgagaggcgtacactctgcaagcagcctcaccagagatc
aaactcaagtggacaagttctattgcccagctgctgtggagacaggcggcccacaacaag
gagctccgagtgcagcagatggtctccatgggaattgggaataaacccttcctggacatc
aaagcccttggggagcggacgctgagtgccctgctcactggaagagccgcccgcacccgg
gcctcggtggccgtgtcatcttttgagcatgccggcccctcccttcccggtctttccccg
ggagcctgttccctgcctgcccgcgtcgaggaggaggcctgggatctggacgtcaagcaa
atttccctggcttcccctccagccccagaaacacttgcctcttctggagatgtgtcccca
ggaccaagaaacagccccagcctgcaacgccctgggagcagcactcccatcctggccagt
ggagggatcttagggctatcccgacagagtcatgcccgagccctgagtgaccccaccaca
cctctgtga
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integrated database retrieval system
