Physeter macrocephalus (sperm whale): 102987968
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Entry
102987968 CDS
T06011
Symbol
HTT
Name
(RefSeq) huntingtin isoform X6
KO
K04533
huntingtin
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad05016
Huntington disease
pcad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102987968 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
102987968 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102987968 (HTT)
04131 Membrane trafficking [BR:
pcad04131
]
102987968 (HTT)
03029 Mitochondrial biogenesis [BR:
pcad03029
]
102987968 (HTT)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102987968 (HTT)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
102987968 (HTT)
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
102987968 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
102987968
NCBI-ProteinID:
XP_023974994
Ensembl:
ENSPCTG00005017818
UniProt:
A0A2Y9SGW1
LinkDB
All DBs
Position
7:complement(143566293..143710692)
Genome browser
AA seq
3135 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQQQPPPPPPQPPQPPPQAQPPPQPQSPPPPPAP
PPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIA
MELFLLCSDDAESDVRMVADECLNRVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALW
RFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKVMASFGNFANDNEI
KVLLKAFIANLKSSSPTVRRTAAGSAVSVCQHSRRTQYFYSWLLSVLLGLLVPVEEEHST
LLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSTEQLVQVYELTLHYTQHQ
DHNVVTGALELLQQLLRTPPPELLRVLTTAGGIGRLTAAKDEPGCRSRSGSIVELIAGGG
SSCSPVLSRKQKGKVLFGEAAALEDDSESRSDGSSPTFAASVKGESGGELAASSGVSTPS
SAADSVGHDIITEQPRSQHTLQTDSVDLTGCDLTSGATDGDEEDILSHSSSQMSAVPSDP
AMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYPGMQVGQRQDEDED
AAVVLPDEDAEAFRSSSIALQQAHLLKSMSHSRQPSDSSIDKFVSRGEAAEPGGQENKPC
RIKGDIGRSRDEDSAPLVHCVRLLSASFLLTGEKHALVPDRDVRVSVKALALSCVGAAVA
LHPESFFGRLYRAPLDTMEYPEERYVSDILNYIDHGDPQVRGATAILCGTLVSSILSRSR
FHVGDWMGTVRTLTGNTFSLADCIPLLQKTLKDESSVTCKLACTAVRLCVMSLCSSSYSE
WGLQLLTDVLALRSSSYWLVRTELLETVAEIDFRLVSFLEAKAENLHRRAHHYTGLLKLQ
ERVLDNIVIYLLGDEDPRVRHVAAASLMRLVPKLFYKCDQGQADAVVAMARGQSSVHLKP
LMHEAQPPSHFSASTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFG
CCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMVTMILTLLSSAWFPLDLS
AHQDALILAGNLLAASAPRSLRSSWASEEEASPAATKQEEVWPALGDRTLVPMVEQLFSH
LLKVVNICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQVSVPVSPKKGG
EASPASRPSETSGPVAATKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQSNTEKFG
AFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPVMATVCVQQLLKTLFGTNL
ASQFDGLSSNPGKSQGRAQRLGSSSVRPGLYHCCFMAPYTHFTQALADASLRNVVQAEQD
HDTSGWFDVLQKVSTQLKTNLTSVAKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQL
QKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLL
SYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKEL
ETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKESEDKWKRLSRQIADIILPMLARQQMH
IDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVIPDTLASVSTVQLWISGILAILRVLI
SQSTEDIVLSRIQELSFSPYLLCCPIINRLRDGDGNSVLEEHSEGRQTKNLPEETFSRFL
LQLVGILLEDIVTKQPRVAMSEQQHTFYCQELGTLLMCLIHIFKSGTFRRITAAASRLLT
DGADGSFYGLESLNAWARSMVPTHPALVLLWCQILLLVSHTDHRWWAELQQTPKRRSLSS
TKSLSPQMSEEDEDSDVASKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQ
DLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQS
GAVLTLYVDKLLCTPFRVLAHMVDTLACRRVEMLLAANLQNSTAQLPAEELSRIQEHLQS
SGLAQRHQRLYSLLDRLRLATAPASRGPAPLVTPHPLDGDGPLALETVSPDKDWYVRLVK
SQCWTRSDSALLEGAELVNRIPPGDLSAFMMNSEFNLSLLAPCLGLGMREICGGQKSPLF
AAARTATLDRVTSVVQQLPAVHHVFQPFLPAEPTAYWSKLDDLFGDAVLYRTLTTLARAL
AQYLLVFSRLPSHLHLPPEKERDTVKFVVMTLEALSWHLIHEQIPLSLDLQAGLDCCCLA
LQLPGLWSLLSSPEMVTHACSLIHCVRFILEAIAVQPGDQLLSPERRTDTPQAAREDEVD
SNTQNPQYVTAACGMVAEMVEALPLVLAWGHKRNSSAPAFLTPVLKNIVVSLARLPLVNS
YTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEET
WATLLGVLVTQPLVMEQEESPPEEDTERTQIHVLAVQAITSLVLSAMTVPVAGNPAVSCL
EQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENVATHHLYQAWDPIPSLSAAT
TGALISHDKLLLQVNPERELGDTSYSLGQVSIHSVWLGNSITPLREEEWGDEEEEEAEVP
APSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPVILISEVVRSLLVV
SDLFTERNQFETMYLTLTELRRVHPSEDEILQQYLVPATCKAAAVLGMDKAVAEPVSRLL
ESTLRSSHLPSKIGALHGVLYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHCVNVHSQQ
HVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIVYHCVLRGLERLLL
SEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSEPSPAAPD
SESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQP
YPQFMATVVYQVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAMWSLSCFFVSASTSP
WVSAILPHVVSRMGKLEHVDVHLFCLVAADFYRHQIEEELDRRAFQSVFEVVAVPGNPYH
RLLACLRNVHKVAAC
NT seq
9408 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtccctcaagtccttccagcagcag
cagcagcagcagcagcagcaacagcagcagccgccgccgccgccgcctcagccccctcag
ccgccgccgcaggcgcagccgccgcctcagccgcagtcgccgccgcccccgccggcgccg
ccgccgccgccgccgccgccgcccggaccggccgtggccgaggagccgctgcatcgacca
aagaaagaactctcagccaccaagaaagaccgtgtgaatcattgtctgacaatatgtgaa
aacatagtggcacagtctctcagaaattctccagaatttcagaaacttctgggcattgct
atggaactttttctgctgtgcagtgatgatgcagagtcagatgtcaggatggtggctgac
gagtgcctcaacagagtcataaaagctttgatggattctaatcttccgaggttacagtta
gaactctataaggaaattaaaaagaacggcgctcctcggagcctgcgcgctgccctgtgg
aggtttgccgagctggctcacctcgttcggcctcagaaatgcaggccttacttggtaaac
cttttgccttgcctgacgcgcacaagcaagaggcccgaggagtctgtccaggagaccttg
gctgcggccgtccctaaggttatggcttctttcggcaactttgcaaacgacaatgaaatt
aaggttctgttaaaggctttcatagcgaatctgaagtccagctctcctaccgtgcggcgg
acagcggccggctcggcggtgagcgtctgccagcactccaggaggacgcagtacttctac
agctggctgctcagtgtgctcttaggtttgctagttcccgtggaggaggaacactccacc
cttctgattctcggagtgctgcttacattgaggtatttggtgcccttgctgcagcagcag
gtcaaggacacgagcctgaaaggcagctttggggtgacacggaaagagatggaggtctct
ccctcgacggagcagcttgtccaggtgtacgaattgaccttgcattatactcagcaccaa
gaccacaatgttgtgaccggggcactggaactcctgcagcagctcctcagaacccctcca
cctgagctcctgcgggtgctgaccacggcgggtggcattggacggctcactgccgctaag
gatgagcccggttgccgaagtcgtagcggaagtatcgtggagcttatagctggagggggt
tcttcctgcagccctgtcctttcaagaaaacaaaaagggaaagtgctcttcggagaagca
gcagccttggaggatgactctgagtcaaggtcagacggcagcagccccacctttgcagcc
tcagtcaagggtgagagtggcggtgagctggcggcctcttctggggtctccactcccagc
tcagctgccgactctgtgggtcacgacatcatcactgagcagccccgctcacagcacaca
cttcagacggactcagtggatctgactggctgtgacttgacgagtggtgccactgatggg
gacgaggaggacatcttgagccacagctccagccagatgagcgccgtcccgtctgaccct
gccatggacctgaacgatgggacccaggcctcctctcccatcagtgacagctcccagacc
accaccgaggggcctgattcagctgtgaccccttccgacagttctgaaattgtgttagat
ggtgccgacagccagtacccagggatgcaggtggggcagcgccaggacgaggatgaggac
gctgctgtggttcttcctgacgaagacgcggaggctttcagaagctcttccatcgccctt
caacaagcacatttgttgaaaagcatgtcccacagcaggcagccctctgacagcagtata
gataaatttgtctcaagaggtgaagctgctgagccaggaggtcaggagaacaagccctgc
cggatcaaaggcgacattggccggtccagggatgaagattctgctcctcttgtccattgc
gtccgccttctgtctgcttcatttttgctaactggggaaaagcacgccttggttccggat
agggatgtgagggtcagtgtgaaggcactggcgctcagctgtgttggagctgctgtggcc
cttcaccctgaatctttcttcggcagactttacagagcaccgcttgacaccatggaatac
cctgaggagcggtacgtgtcagacatcttgaactacatcgaccacggggacccacaggtc
agaggggccacagctatcctctgtgggacccttgtctcctccatcctcagcaggtcccgc
ttccacgtgggagactggatgggcaccgtcagaactctgacaggaaatacattttctctg
gcggactgcattcccctgctgcagaagactttgaaggacgaatcttctgttacttgcaag
ttggcttgtacagctgtgaggctctgcgtcatgagtctctgcagcagcagctacagcgag
tgggggctgcagctcctcactgacgtgctggccctgcggagcagctcctactggctggtg
aggacggagcttctggagaccgtggcagagatcgacttcaggttggtgagctttttggag
gcaaaagcagaaaacctacacagaagggcccatcattatacagggcttttaaaactgcaa
gaacgagtgctcgataacattgtcatctatttgcttggggatgaagaccccagggtgcgc
catgttgctgcagcttcgttaatgaggcttgtcccgaagctgttttataagtgcgaccaa
ggacaggctgacgcagtcgtggccatggcgagaggtcaaagcagcgttcacctgaagcct
ctcatgcacgaggcgcagcctccatctcacttctccgccagcaccataaccagaatatat
agaggctataacctactaccaagcataacagacgtcactatggaaaataacctttcgaga
gtcattgcagcagtttctcatgagctaatcacatcaaccacgagggcgctcacattcgga
tgctgtgaagctctgtgtcttctttcaactgcctttccagtttgcatttggagtttaggt
tggcattgtggagtgcccccactgagcgcctctgatgagtctagaaagagctgtactgtg
ggcatggtcacgatgatcctgaccctgctttcatcagcctggttcccactggatctctca
gcccatcaagatgctttgattttagccgggaacttgcttgcagccagtgcccccagatct
ctgaggagttcctgggcctccgaagaagaggccagccctgcagccaccaagcaggaagag
gtgtggccggctctgggtgaccggaccctggtgcccatggtggagcagctcttctcccac
ctgctgaaggtggtcaacatctgtgcacacgtcctggatgatgtggctcctggaccagca
ataaaggcagccttgccgtctctaacaaacccgccttctctgagtccaatccgacggaag
ggaaaagagaaggaacccggagagcaggtgtctgtacccgtgagtcccaagaaaggcggt
gaggccagtccagcctctcgaccatctgaaacctcagggcctgttgcagcaaccaagtcc
tcgtcactggggagtttctatcaccttccttcttaccttaaattgcacgatgtcctgaaa
gctacacacgcaaactacaaggtcaccttggatcttcagagcaacaccgaaaagtttggg
gcttttctgcgctctgccttggatgttctctctcagattctagagttggcaacactgcag
gacatcgggaagtgtgttgaagagatcctggggtacctgaaatcctgcttcagtcgagaa
ccagtgatggcaactgtttgtgtccagcagctgctgaagactctctttgggacaaacttg
gcctcccagtttgacggcttatcctccaaccccggcaagtctcaaggccgcgcgcagcgc
cttggctcttccagcgtgaggccgggcttgtaccactgctgcttcatggctccatacacc
cacttcacccaggccttagccgacgccagcctaaggaacgtggtgcaggcagagcaggac
cacgacacctcagggtggtttgacgtactccagaaagtgtctacccaattgaagacaaac
ctcaccagcgtcgcaaagaaccgcgcggacaagaatgctattcataatcacattcgttta
tttgagcctcttgttataaaagctttaaaacagtacacgacaacaacctctgtgcagtta
cagaagcaggttttggatttgctggcacagctggttcagttacgggttaattactgcctt
ctggattcggatcaggtgtttattggatttgtgctgaagcagtttgaatacattgaagta
ggacagttcagggaatcagaggcaattattccaaacatctttttcttcctggtattactg
tcttatgaacgctatcattcaaaacagatcattggaattcctaaaatcatccagctctgt
gacggcatcatggccagtgggaggaaagctgtgacgcacgccataccagccctgcagccc
atagtccacgacctcttcgttttaagaggaaccaataaagctgatgcaggaaaagagctt
gaaacccagaaagaggtggtggtgtcaatgttactgagactcatccagtaccatcaggtg
ttggagatgttcatcctggtcctgcagcagtgccacaaggagagcgaggacaagtggaag
cggctgtctcggcagatagccgacatcatcctcccgatgttggccaggcaacagatgcac
attgattctcacgaagcgctcggagtgttaaatacgttatttgagattttggccccttcc
tccctccgtcccgtggacatgcttttacggagtatgttcgtcatcccagataccctggca
tctgtgagcactgttcaactatggatatccggaatcctagccattttgagggttctgatt
tcccagtcaactgaagatattgttctttctcgtattcaggagctttccttctctccatat
ttactctgctgtccgataattaataggttaagagatggggacggtaattcagtactggaa
gaacacagtgaagggagacaaacgaagaatttgccagaagaaacattttccaggtttctg
ctgcagctggttggcatccttttggaggacattgttacaaagcagccgagagtggcaatg
agcgagcagcagcatactttctactgccaagagctaggcacgctgctcatgtgtctgatc
cacatcttcaagtctgggacattccggagaatcactgcagctgcctcgagactcctgacg
gacggcgcggacggcagcttctatggcctggagagcttgaacgcgtgggcgcgctccatg
gtccccacccacccggccctggtgctgctctggtgccagatcctgctgcttgtcagccac
accgaccaccgctggtgggcagagctgcagcagacccccaaaagacgcagtctgtccagc
acgaagtcacttagtccccagatgtctgaagaggacgaggattctgatgtggcttccaaa
ctgggaatgtgcaatagagaaatagtacgaagaggagctctcattctcttctgcgattat
gtctgccagaacctgcacgattcagagcacttaacctggctcatcgtcaaccatattcag
gatctgatcagcctgtcccacgagcctcccgtgcaggacttcattagtgctgtccatcgg
aattccgcggccagtggccttttcatccaggcaattcagtctcgttgtgaaaatctttca
actcccaccacactgaagaaaaccctccagtgcctggaagggatccacctgagccagtcg
ggcgccgtgctgacgctgtacgtggacaagcttttgtgtactccattccgtgtgctggct
cacatggtcgacacccttgcttgtcgccgggtggagatgcttctggctgcaaatttacag
aacagcacggcccagctgccggcagaagagctcagcaggatccaggagcacctgcagagc
agcgggttagcgcagagacaccaaaggctctactccctgctggacaggcttcgtctcgcc
actgcaccggcgtcgcgtggccccgctcctctggtcacgccccacccgctggacggggac
gggcccctggcactggagacagtgagtcctgacaaagactggtacgtacgtctggtcaaa
tcccagtgctggacgcggtcagactctgcactgctggaaggggcagagctggtgaatcgg
atccctccgggtgacttgagcgcgttcatgatgaactcggagttcaacctgagcctgcta
gccccgtgcttgggcctgggcatgcgtgagatctgtgggggccagaagagcccccttttt
gcggcagctcgcacggcaactctagaccgtgtgaccagtgtggttcagcagctgcccgct
gtccaccacgttttccagccgttcctgcctgcagagcccaccgcctactggagcaagttg
gatgatctctttggggatgccgtgctgtatcggaccctgaccactctggcccgggccctg
gcccagtacctgctggtgttctccagactgcccagccacttgcaccttcctcctgagaag
gagagggacaccgtgaagtttgtggtcatgaccctcgaggccctgtcgtggcatttgatc
cacgagcagatcccgctgagtttggacctgcaggcgggcctggactgctgctgcctggct
ctgcagctgcccggcctctggagcctgctctcctccccggagatggtgacccacgcctgc
tccctcatccactgtgtgcggttcatcctagaagccattgcggtgcagcccggggaccag
cttcttagcccagaaagaaggacggacaccccacaggccgccagagaggacgaagtggat
tcaaacacgcagaaccctcagtatgtcactgcagcctgtgggatggtggccgagatggtg
gaggcactgccgttggtgctggcctggggtcacaaaaggaacagcagcgccccggcgttc
ctcacgccggtgctcaagaacattgtcgtcagcctggcccgcctgcccctcgtcaacagc
tacacgcgcgtcccgcccctggtgtggaaactcggatggtcacccaaaccaggaggggat
tttggcaccgcgttccccgagatccccgtggagttcctccaggaaaaggaagtcttcaaa
gagttcatctaccgcatcaatacgctagggtggaccagccgtacccagtttgaggaaacg
tgggccaccctcctcggtgtgctggtgactcagcccctcgtgatggagcaagaggagagc
ccacccgaggaggacacggagaggacccagatccacgtcctggccgtgcaggccatcacc
tccctggtgctgagcgcgatgactgtgcccgtggccggcaacccagccgtgagctgcttg
gagcagcagccccggaacaagcccctgaaggccctcgacaccaggttcgggaggaagttg
agcatcatcagaggaatcgtagagcaggaaattcaagcgatggtttcaaagagggagaac
gtcgccacccatcatctgtaccaggcgtgggaccccatcccttctctgtctgcagccact
acaggtgccctcatcagccacgacaagctcctgctgcaggtcaaccccgagcgggagctg
ggggacacgagctacagcctcggccaggtgtccatccattccgtctggctggggaacagc
atcacgcccctgagagaggaggagtggggcgacgaggaggaggaggaggccgaggtcccc
gcaccgtcgtccccgcccacgtctccagtcaactccaggaaacaccgggctggagtcgac
atccattcctgttcgcagtttttgctcgagttgtacagtcgctggatcctgccgtcaagt
tcagccaggaggacccccgtcatcctgatcagcgaggtggtgcggtcgctcctcgtggtc
tcagacttgtttacggagcgcaaccagtttgagacgatgtacctgacgctgacagagctg
cggagggtgcacccttcggaagatgagattctccaacagtacctggtgcccgccacctgc
aaggcggccgccgtcctcgggatggacaaggccgtggcggagccggtgagccggctgctg
gagagcacgctcagaagtagccatctgcccagcaagatcggagccctgcatggcgtcctc
tacgtgctggagtgcgacctcctggacgacaccgccaagcagctcatccccgtcatcagc
gactatctcctctccaacctcaaaggcatagcccactgcgtgaacgtccacagccagcag
cacgtgctggtgatgtgtgccacggccttctacctgattgagaactaccccctggacgtc
gggccggagttctcggcatccataatacagatgtgtggggtgatgctgtctggaagcgag
gagtccaccccatccatcgtgtaccactgtgtcctgaggggcctggagcgcctcctgctc
tccgagcagctctcccggctggatgcggagtccctggtcaagctgagcgtggacagagtg
aacgtgcacagcccgcaccgcgccatggcggccctgggcctgatgctcacctgtatgtac
acaggaaaggagaaaatcagtccaggcagaacctcagagcccagccctgccgcccccgac
agcgagtccgtgattgtggccatggagcgtgtgtctgttctttttgacaggatcaggaag
gggtttccctgtgaagccagagtggtggcgcggatcctcccccagtttctagatgacttc
ttcccgccccaggacgtcatgaacaaggtcatcggagagtttctgtccaaccagcaaccg
tacccgcagttcatggccaccgtagtgtaccaggtgttccagactctgcacagcacaggg
cagtcgtccatggtccgggactgggtcatgctgtccctctccaacttcacgcagaggacc
ccggttgccatggccatgtggagcctctcctgcttcttcgtcagcgcttccaccagcccg
tgggtttcggcgatccttccccacgtcgtgagcaggatgggcaagctggagcacgtggac
gtgcacctcttctgcctggtggccgcggacttctacagacaccagatagaggaggagctc
gaccgcagggccttccagtctgtgttcgaggtggtcgcggtgccaggaaacccgtatcac
cgcctgctggcttgtttgcggaacgtccacaaggtcgccgcgtgctga
DBGET
integrated database retrieval system
