Physeter macrocephalus (sperm whale): 102988038
Help
Entry
102988038 CDS
T06011
Symbol
SLC6A4
Name
(RefSeq) LOW QUALITY PROTEIN: sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04082
Neuroactive ligand signaling
pcad04721
Synaptic vesicle cycle
pcad04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102988038 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102988038 (SLC6A4)
04721 Synaptic vesicle cycle
102988038 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcad02000
]
102988038 (SLC6A4)
Transporters [BR:
pcad02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102988038 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102988038
NCBI-ProteinID:
XP_023983382
Ensembl:
ENSPCTG00005007871
UniProt:
A0A2Y9T1I0
LinkDB
All DBs
Position
14:93654234..93687875
Genome browser
AA seq
612 aa
AA seq
DB search
MEKIVKEMVFYRRVSLPLGIGRSLAKSRTGTQQPSPGAEDTQHSIPAATTALVAEVHPGE
RETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYTIMAVFGGIPLFYMELA
LGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIMAWALYYLISSFAAQLPWT
SCKNSWNTGNCTNYFSEDNITWTLHSTSPAEEFYMRHVLQIHRSKGLQDLGGISWQLALC
IMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILLILLVRGATLPGAWRGVLFYLKPNWQ
KLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMTSFVSGFV
IFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPASTFFAIIFFLMLITLGLDS
TFAGLEGVITAVLDEFPHIWSKRREWFVLSVVITCFFGSLITLTFGGAYVVKLLEEFATG
PAVLTVALIEAIAVYWFYGINQFCSDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLM
SPPQLRLFQYNYPQWSIILGYCIGTSSFICIPMYITYRLIITPGTLKERLIKGITPETPT
EIPCGDIHLNAV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggagaagattgtcaaggaaatggtgttctacagaagggtgtccctgcccctggggata
gggcggagtctggccaaatctcgaacgggtactcagcagccaagccccggtgcagaagac
actcagcattccatcccggctgccaccaccgccttagtggctgaggttcatccaggggaa
cgggagacctggggcaagaaggtggatttcctcctctccgtcattggctacgctgtggac
ctgggcaacgtctggcgctttccctacatctgttaccagaatggagggggggcattcctc
ctcccctacactatcatggccgttttcggggggatcccgctcttctacatggagctcgcg
ctgggccagtaccaccgaaatggatgcatttcgatatggaggaaaatctgcccaattttc
aaagggatcggttacgccatctgcatcattgccttttacatcgcctcctactacaacacc
atcatggcctgggcgctctactacctcatctcctcttttgcggcccagctgccctggacc
agctgtaagaactcctggaacactggcaactgcaccaactacttctccgaggacaacatc
acctggacactccactcaacatcccctgcagaagaattttatatgcgccacgtcctgcag
atccaccggtcaaaggggctccaggacctggggggcatcagctggcagcttgccctctgc
atcatgctgatcttcactattatctactttagcatctggaaaggtgtcaaaacatctggc
aaggtggtttgggtaacagccaccttcccttacatcatccttttgatcctgctggtgagg
ggggccaccctccccggagcctggaggggagttctcttctatttgaaacccaactggcag
aaactcctggagacaggggtgtgggtggatgcggccgcccagatcttcttctctctcggt
cctggctttggggtcctgctggcttttgcgagctacaacaaattcaacaacaactgttac
caagatgccttggtgaccagtgtggtgaactgcatgacgagcttcgtttcaggatttgtc
atcttcacagtgctggggtatatggctgagatgaggaacgaagatgtgtctgaggtggcc
aaagatgcaggccccagcctgctcttcatcacatatgcggaagccatagccaacatgccg
gcatccacgttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagc
acatttgcaggcttggagggggtgatcacagctgtgctggatgagtttccacatatctgg
tccaagcgccgggagtggtttgtgctcagcgtggtcattacctgcttctttggctccctg
atcaccctgacttttggaggggcctacgtggtgaagctgctggaggagtttgccacggga
cccgcagtgctcactgttgccctgatagaagcaattgctgtgtattggttctatggcatc
aatcagttctgcagtgatgtgaaggaaatgcttggtttcagccctggatggttttggagg
atctgctgggtagccatcagccccctgtttctcctgttcatcatttgcagttttttgatg
agcccaccacagctacgactttttcagtataattatcctcagtggagtatcatcctgggt
tactgcataggaacctcatctttcatctgcatcccgatgtatataacttatcggctgatc
atcactccagggacacttaaggagcgtcttattaaaggtatcactccagaaacaccgaca
gaaattccctgtggggatatccacttgaacgctgtgtaa
DBGET
integrated database retrieval system
