Physeter macrocephalus (sperm whale): 102988202
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Entry
102988202 CDS
T06011
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102988202 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcad01009
]
102988202 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcad04515
]
102988202 (PCDH20)
Protein phosphatases and associated proteins [BR:
pcad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102988202 (PCDH20)
Cell adhesion molecules [BR:
pcad04515
]
Cadherins
Protocadherins
102988202 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
102988202
NCBI-ProteinID:
XP_007120299
Ensembl:
ENSPCTG00005006653
UniProt:
A0A2Y9FFB1
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All DBs
Position
13:complement(35481308..35485200)
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AA seq
950 aa
AA seq
DB search
MRGRGDAHSSRALPVSWRPATWHPRLDMGRLSRSRSSTSHRNLPHLLLFFLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPGAGRQDPQSQPLEHSGAERNPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISISSSPSTDSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSEISVWVPENAPVNTRLAIEHPAMDRDTG
TNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLDENTGVIKLVSKIGGSVLQTHKLTILANGPGCIPAVITALVTIIKVI
FRPPEIVPRYIANEIDGIVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYSNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKKMIKVQLLDDNDNAPIFLQPLV
ELTIEENNSPNAFLTKLDATDADSGESGQVSYFLGPDAPSYFSLDSVTGVLTVSAQLDRE
EKEKYKYTVRAVDSGKPPKESVATVAITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGQNGWVALSVVNQSDIFVIDTGRGMLRAKVSLDREQQSSYTLWVEAVDGGEP
PLSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVEPVSCMPTLVTLSVINLGS
ITLVTGMGIYICLRGKRHHREDENLEIQIPLKGKIDLHMRERKPMDISNI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgaggggatgcgcacagctcgcgggccctgccagtgagctggcgcccagcg
acctggcacccgcgcctggatatggggcgtctaagtcgttccaggagcagcaccagccac
agaaacctaccgcatctgcttctgtttttcctcttcgtgggacccttcaactgcctggcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctggtgcccggagcagggaggcaggacccg
cagtcgcagcccctggagcacagcggcgccgagcggaaccctcctctctccttcagcctg
gcctcccagggactgagtggccagtacgtgaccctagacaaccgctccggggagctgcac
acttctgcccaggagatcgacagggaggccctgtgtcttgaaggaggtggaggggctgcc
tgggggggcagcatttccatctcctcttcgccttccactgactcatgtcttttgcttctg
gatgtactggtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgctatccgg
gacatcaatgacaacgccccacagttccctgtttccgaaatatcggtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccatggaccgagatacaggc
actaacggagttcagacctaccgcttgctggactaccatcgtatgttcaccctggacgtg
gaggagaatgagaatggggagcgaaccccctacctaattgtcatgggactgttggacagg
gagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactg
ttgggcagtgccaccctcaccattggcataagtgacattaatgacaattgccctctcttc
acagactcacaaatcaatgtcactgtgtatgggaatgctacagtgggcacaccgattgca
gctgtccaggctgtggacagagacttgggaaacaatgctcagatcacctactcttacagc
cagaaagttccacaagcatccaaggatttattccatctggatgaaaacactggagtcatt
aaacttgtcagtaagattggaggaagtgttctgcaaacacacaagctcaccattcttgct
aatgggccgggttgcatccctgctgtgataactgctctggtgaccattatcaaagtcatt
ttcagaccacctgaaattgtccctcgttatatagcgaatgagatagatggtattgtttac
ctgaaagaactggaacctgttaacactccaattgcatttttcaccataagagatccagaa
ggtaaatacaaggttaactgctacttggatggtgaaggaccatttaggttatcaccctac
aaaccatacagtaatgaatatctgctagaaaccacaaaacctatggattatgagctacag
cagttctatgaaatagctgtggtagcctggaactctgagggatttcatgtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctattttccttcaacccttggtg
gaactaaccattgaagaaaacaactcacccaatgcctttttgactaagctagatgctaca
gatgctgacagtggagagagtggacaagtttcatattttctgggacctgatgctccatca
tatttttccttagacagtgtcacaggagttctgacagtttctgctcagctggatcgagaa
gagaaagaaaagtacaagtacacagtcagagctgttgactctgggaagccacccaaagaa
tcagtagccaccgtggctatcacagtgttggataaaaatgacaacagtcccaggttcatc
aacaaggacttcagcttctttgtgccagaaaactttccaggatatggtgaaattggagta
attagtgtaacagatgccgatgctgggcaaaatggatgggttgccctctccgtggtgaac
cagagtgatatttttgtcatagacacaggaaggggcatgctgagagccaaagtttctttg
gacagagagcagcaaagctcctatactttgtgggttgaagctgttgatggaggtgagcct
cccctctcctctaccacaaaaatcacaattctccttctagatatcaacgacaacccacct
cttgttttatttcctcaatctaacatgtcttacctgttggtattaccttctactctccct
ggatccccagttacagaggtctatgcagttgacaaagacacaggcatgaatgctgtcata
gcttacagcatcatagggagaagaggtcctaggcctgagtcatttaggattgaccctaaa
actggcaacattactttggaggaggcattgctgcagacagattatgggctccatcgttta
ctggtgaaagtgagtgatcatggttatcccgaacctctccattccacggtcatggtgaac
ttatttgtcaatgacactgtcagtaatgagagctacattgagagtcttttaagaaaggaa
ccagaaattaacatagaggagaaagaaccacagatctcaatagaaccaactcataggaaa
gttgagcctgtgtcttgtatgcccaccttagtaactctgtctgtaataaatttgggttct
atcactctcgtaacagggatgggcatatacatctgtttgagagggaaaaggcatcacagg
gaggatgaaaatttggaaatacaaattccattaaaaggaaaaattgacttgcatatgaga
gagaggaaaccaatggatatttctaatatttga
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