KEGG   Physeter macrocephalus (sperm whale): 102988202
Entry
102988202         CDS       T06011                                 
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    102988202 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pcad01009]
    102988202 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:pcad04515]
    102988202 (PCDH20)
Protein phosphatases and associated proteins [BR:pcad01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102988202 (PCDH20)
Cell adhesion molecules [BR:pcad04515]
 Cadherins
  Protocadherins
   102988202 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th RET_CLD1
Other DBs
NCBI-GeneID: 102988202
NCBI-ProteinID: XP_007120299
Ensembl: ENSPCTG00005006653
UniProt: A0A2Y9FFB1
LinkDB
Position
13:complement(35481308..35485200)
AA seq 950 aa
MRGRGDAHSSRALPVSWRPATWHPRLDMGRLSRSRSSTSHRNLPHLLLFFLFVGPFNCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPGAGRQDPQSQPLEHSGAERNPPLSFSL
ASQGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISISSSPSTDSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSEISVWVPENAPVNTRLAIEHPAMDRDTG
TNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDRDLGNNAQITYSYS
QKVPQASKDLFHLDENTGVIKLVSKIGGSVLQTHKLTILANGPGCIPAVITALVTIIKVI
FRPPEIVPRYIANEIDGIVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYSNEYLLETTKPMDYELQQFYEIAVVAWNSEGFHVKKMIKVQLLDDNDNAPIFLQPLV
ELTIEENNSPNAFLTKLDATDADSGESGQVSYFLGPDAPSYFSLDSVTGVLTVSAQLDRE
EKEKYKYTVRAVDSGKPPKESVATVAITVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGQNGWVALSVVNQSDIFVIDTGRGMLRAKVSLDREQQSSYTLWVEAVDGGEP
PLSSTTKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVEPVSCMPTLVTLSVINLGS
ITLVTGMGIYICLRGKRHHREDENLEIQIPLKGKIDLHMRERKPMDISNI
NT seq 2853 nt   +upstreamnt  +downstreamnt
atgcgcggccgaggggatgcgcacagctcgcgggccctgccagtgagctggcgcccagcg
acctggcacccgcgcctggatatggggcgtctaagtcgttccaggagcagcaccagccac
agaaacctaccgcatctgcttctgtttttcctcttcgtgggacccttcaactgcctggcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgcccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctggtgcccggagcagggaggcaggacccg
cagtcgcagcccctggagcacagcggcgccgagcggaaccctcctctctccttcagcctg
gcctcccagggactgagtggccagtacgtgaccctagacaaccgctccggggagctgcac
acttctgcccaggagatcgacagggaggccctgtgtcttgaaggaggtggaggggctgcc
tgggggggcagcatttccatctcctcttcgccttccactgactcatgtcttttgcttctg
gatgtactggtcctgcctcaggaatactttaggtttgtgaaggtgaaaatcgctatccgg
gacatcaatgacaacgccccacagttccctgtttccgaaatatcggtttgggtcccagaa
aatgcacctgtaaacacccggctggccatagagcatcctgccatggaccgagatacaggc
actaacggagttcagacctaccgcttgctggactaccatcgtatgttcaccctggacgtg
gaggagaatgagaatggggagcgaaccccctacctaattgtcatgggactgttggacagg
gagacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactg
ttgggcagtgccaccctcaccattggcataagtgacattaatgacaattgccctctcttc
acagactcacaaatcaatgtcactgtgtatgggaatgctacagtgggcacaccgattgca
gctgtccaggctgtggacagagacttgggaaacaatgctcagatcacctactcttacagc
cagaaagttccacaagcatccaaggatttattccatctggatgaaaacactggagtcatt
aaacttgtcagtaagattggaggaagtgttctgcaaacacacaagctcaccattcttgct
aatgggccgggttgcatccctgctgtgataactgctctggtgaccattatcaaagtcatt
ttcagaccacctgaaattgtccctcgttatatagcgaatgagatagatggtattgtttac
ctgaaagaactggaacctgttaacactccaattgcatttttcaccataagagatccagaa
ggtaaatacaaggttaactgctacttggatggtgaaggaccatttaggttatcaccctac
aaaccatacagtaatgaatatctgctagaaaccacaaaacctatggattatgagctacag
cagttctatgaaatagctgtggtagcctggaactctgagggatttcatgtcaaaaaaatg
attaaagtgcaacttttagatgacaatgataatgctcctattttccttcaacccttggtg
gaactaaccattgaagaaaacaactcacccaatgcctttttgactaagctagatgctaca
gatgctgacagtggagagagtggacaagtttcatattttctgggacctgatgctccatca
tatttttccttagacagtgtcacaggagttctgacagtttctgctcagctggatcgagaa
gagaaagaaaagtacaagtacacagtcagagctgttgactctgggaagccacccaaagaa
tcagtagccaccgtggctatcacagtgttggataaaaatgacaacagtcccaggttcatc
aacaaggacttcagcttctttgtgccagaaaactttccaggatatggtgaaattggagta
attagtgtaacagatgccgatgctgggcaaaatggatgggttgccctctccgtggtgaac
cagagtgatatttttgtcatagacacaggaaggggcatgctgagagccaaagtttctttg
gacagagagcagcaaagctcctatactttgtgggttgaagctgttgatggaggtgagcct
cccctctcctctaccacaaaaatcacaattctccttctagatatcaacgacaacccacct
cttgttttatttcctcaatctaacatgtcttacctgttggtattaccttctactctccct
ggatccccagttacagaggtctatgcagttgacaaagacacaggcatgaatgctgtcata
gcttacagcatcatagggagaagaggtcctaggcctgagtcatttaggattgaccctaaa
actggcaacattactttggaggaggcattgctgcagacagattatgggctccatcgttta
ctggtgaaagtgagtgatcatggttatcccgaacctctccattccacggtcatggtgaac
ttatttgtcaatgacactgtcagtaatgagagctacattgagagtcttttaagaaaggaa
ccagaaattaacatagaggagaaagaaccacagatctcaatagaaccaactcataggaaa
gttgagcctgtgtcttgtatgcccaccttagtaactctgtctgtaataaatttgggttct
atcactctcgtaacagggatgggcatatacatctgtttgagagggaaaaggcatcacagg
gaggatgaaaatttggaaatacaaattccattaaaaggaaaaattgacttgcatatgaga
gagaggaaaccaatggatatttctaatatttga

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